Difference between revisions of "FISUC RS03645"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction GARTRANSFORMYL2-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.1.2 ec-2.1.2] * direction: ** left-to-right == Reaction formula == * 1...")
(Created page with "Category:gene == Gene FISUC_RS03645 == * transcription-direction: ** positive * centisome-position: ** 22.586376 * left-end-position: ** 867912 * right-end-position: *...")
 
(6 intermediate revisions by 3 users not shown)
Line 1: Line 1:
−
[[Category:reaction]]
+
[[Category:gene]]
−
== Reaction GARTRANSFORMYL2-RXN ==
+
== Gene FISUC_RS03645 ==
−
* ec-number:
+
* transcription-direction:
−
** [http://enzyme.expasy.org/EC/2.1.2 ec-2.1.2]
+
** positive
−
* direction:
+
* centisome-position:
−
** left-to-right
+
** 22.586376   
−
== Reaction formula ==
+
* left-end-position:
−
* 1 [[5-PHOSPHO-RIBOSYL-GLYCINEAMIDE]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[FORMATE]][c] '''=>''' 1 [[5-P-RIBOSYL-N-FORMYLGLYCINEAMIDE]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
+
** 867912
−
== Gene(s) associated with this reaction  ==
+
* right-end-position:
−
* Gene: [[FSU_RS04650]]
+
** 868910
−
** Category: [[orthology]]
+
== Organism(s) associated with this gene  ==
−
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
+
* [[fsucgem]]
−
*** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
+
== Reaction(s) associated ==
−
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
+
* [[ALDOSE-1-EPIMERASE-RXN]]
−
== Pathway(s) ==
+
** Category: [[annotation]]
−
* [[PWY-6277]], superpathway of 5-aminoimidazole ribonucleotide biosynthesis:
+
*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
−
** '''7''' reactions found over '''5''' reactions in the full pathway
+
* [[ALDOSE1EPIM-RXN]]
−
* [[PWY-6122]], 5-aminoimidazole ribonucleotide biosynthesis II:
+
** Category: [[annotation]]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
−
== Reconstruction information  ==
+
== Pathway(s) associated ==
−
* category: [[orthology]]; source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
+
* [[PWY0-1466]]
−
* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
+
* [[PWY-6317]]
−
== External links  ==
+
** '''3''' reactions found over '''5''' reactions in the full pathway
−
* RHEA:
+
* [[PWY66-422]]
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24830 24830]
+
** '''3''' reactions found over '''5''' reactions in the full pathway
−
* LIGAND-RXN:
+
{{#set: transcription-direction=positive}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R06974 R06974]
+
{{#set: centisome-position=22.586376    }}
−
{{#set: ec-number=ec-2.1.2}}
+
{{#set: left-end-position=867912}}
−
{{#set: direction=left-to-right}}
+
{{#set: right-end-position=868910}}
−
{{#set: nb gene associated=1}}
+
{{#set: organism associated=fsucgem}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb reaction associated=2}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: nb pathway associated=3}}
−
{{#set: reconstruction tool=orthofinder}}
 
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=bifidobacterium|bthetaiotaomicron|ecoli}}
 

Latest revision as of 11:21, 17 October 2022

Gene FISUC_RS03645

  • transcription-direction:
    • positive
  • centisome-position:
    • 22.586376
  • left-end-position:
    • 867912
  • right-end-position:
    • 868910

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY0-1466
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6317
    • 3 reactions found over 5 reactions in the full pathway
  • PWY66-422
    • 3 reactions found over 5 reactions in the full pathway




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FISUC_RS03645&oldid=94694"