Difference between revisions of "FISUC RS11085"

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(Created page with "Category:reaction == Reaction PYRIMSYN1-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/4.1.99.17 ec-4.1.99.17] * direction: ** left-to-right * common-name: ** phospho...")
(Created page with "Category:gene == Gene FISUC_RS11085 == * transcription-direction: ** positive * centisome-position: ** 70.7457 * left-end-position: ** 2718499 * right-end-position: **...")
 
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction PYRIMSYN1-RXN ==
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== Gene FISUC_RS11085 ==
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* ec-number:
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* transcription-direction:
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** [http://enzyme.expasy.org/EC/4.1.99.17 ec-4.1.99.17]
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** positive
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* direction:
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* centisome-position:
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** left-to-right
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** 70.7457   
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* common-name:
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* left-end-position:
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** phosphomethylpyrimidine synthase thic
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** 2718499
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== Reaction formula ==
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* right-end-position:
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* 1 [[5-PHOSPHORIBOSYL-5-AMINOIMIDAZOLE]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[AMINO-HYDROXYMETHYL-METHYL-PYR-P]][c] '''+''' 1 [[CARBON-MONOXIDE]][c] '''+''' 1 [[CH33ADO]][c] '''+''' 1 [[FORMATE]][c] '''+''' 1 [[MET]][c] '''+''' 3 [[PROTON]][c]
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** 2719710
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== Gene(s) associated with this reaction  ==
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== Organism(s) associated with this gene  ==
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* Gene: [[FSU_RS04020]]
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* [[fsucgem]]
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== Reaction(s) associated ==
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* [[ACETYLORNTRANSAM-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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* Gene: [[FISUC_RS02135]]
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* [[RXN-15007]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) ==
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== Pathway(s) associated ==
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* [[PWY-6890]], 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis:
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* [[PWY-5154]]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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** '''7''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* [[ARGSYNBSUB-PWY]]
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* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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** '''9''' reactions found over '''9''' reactions in the full pathway
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== External links  ==
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* [[GLUTORN-PWY]]
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* RHEA:
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** '''5''' reactions found over '''5''' reactions in the full pathway
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24841 24841]
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* [[PWY-7400]]
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{{#set: ec-number=ec-4.1.99.17}}
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** '''7''' reactions found over '''9''' reactions in the full pathway
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{{#set: direction=left-to-right}}
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{{#set: transcription-direction=positive}}
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{{#set: common-name=phosphomethylpyrimidine synthase thic}}
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{{#set: centisome-position=70.7457    }}
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{{#set: nb gene associated=2}}
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{{#set: left-end-position=2718499}}
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{{#set: nb pathway associated=1}}
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{{#set: right-end-position=2719710}}
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{{#set: reconstruction category=annotation}}
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{{#set: organism associated=fsucgem}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: nb reaction associated=2}}
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{{#set: reconstruction comment=n.a}}
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{{#set: nb pathway associated=4}}
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{{#set: reconstruction source=genome}}
 

Latest revision as of 11:21, 17 October 2022

Gene FISUC_RS11085

  • transcription-direction:
    • positive
  • centisome-position:
    • 70.7457
  • left-end-position:
    • 2718499
  • right-end-position:
    • 2719710

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5154
    • 7 reactions found over 9 reactions in the full pathway
  • ARGSYNBSUB-PWY
    • 9 reactions found over 9 reactions in the full pathway
  • GLUTORN-PWY
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7400
    • 7 reactions found over 9 reactions in the full pathway




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FISUC_RS11085&oldid=94706"