Difference between revisions of "FISUC RS09415"

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(Created page with "Category:reaction == Reaction 2-DEHYDROPANTOATE-REDUCT-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.169 ec-1.1.1.169] * direction: ** left-to-right * common-n...")
(Created page with "Category:gene == Gene FISUC_RS09415 == * common-name: ** mqnb * transcription-direction: ** positive * centisome-position: ** 60.55688 * left-end-position: ** 2326980...")
 
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction 2-DEHYDROPANTOATE-REDUCT-RXN ==
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== Gene FISUC_RS09415 ==
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* ec-number:
 
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** [http://enzyme.expasy.org/EC/1.1.1.169 ec-1.1.1.169]
 
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* direction:
 
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** left-to-right
 
 
* common-name:
 
* common-name:
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** 2-dehydropantoate 2-reductase
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** mqnb
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== Reaction formula ==
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* transcription-direction:
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* 1 [[2-DEHYDROPANTOATE]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[L-PANTOATE]][c] '''+''' 1 [[NADP]][c]
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** positive
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== Gene(s) associated with this reaction  ==
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* centisome-position:
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* Gene: [[FSU_RS06490]]
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** 60.55688   
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* left-end-position:
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** 2326980
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* right-end-position:
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** 2327690
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== Organism(s) associated with this gene  ==
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* [[fsucgem]]
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== Reaction(s) associated ==
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* [[RXN-9780]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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* Gene: [[FISUC_RS04600]]
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== Pathway(s) associated ==
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** Category: [[annotation]]
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* [[PWY-7374]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** '''6''' reactions found over '''6''' reactions in the full pathway
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* Gene: [[FSU_RS03445]]
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{{#set: common-name=mqnb}}
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** Category: [[orthology]]
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{{#set: transcription-direction=positive}}
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*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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{{#set: centisome-position=60.55688    }}
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*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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{{#set: left-end-position=2326980}}
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== Pathway(s) ==
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{{#set: right-end-position=2327690}}
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* [[PWY-6654]], phosphopantothenate biosynthesis III (archaebacteria):
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{{#set: organism associated=fsucgem}}
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** '''2''' reactions found over '''4''' reactions in the full pathway
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{{#set: nb reaction associated=1}}
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* [[PANTO-PWY]], phosphopantothenate biosynthesis I:
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{{#set: nb pathway associated=1}}
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** '''4''' reactions found over '''4''' reactions in the full pathway
 
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== Reconstruction information  ==
 
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* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
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* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 
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== External links  ==
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16235 16235]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R02472 R02472]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/Q9CFY8 Q9CFY8]
 
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** [http://www.uniprot.org/uniprot/Q9V0N0 Q9V0N0]
 
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{{#set: ec-number=ec-1.1.1.169}}
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=2-dehydropantoate 2-reductase}}
 
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{{#set: nb gene associated=3}}
 
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{{#set: nb pathway associated=2}}
 
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{{#set: reconstruction category=annotation|orthology}}
 
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{{#set: reconstruction tool=orthofinder|pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=genome|bthetaiotaomicron|ecoli}}
 

Latest revision as of 11:21, 17 October 2022

Gene FISUC_RS09415

  • common-name:
    • mqnb
  • transcription-direction:
    • positive
  • centisome-position:
    • 60.55688
  • left-end-position:
    • 2326980
  • right-end-position:
    • 2327690

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7374
    • 6 reactions found over 6 reactions in the full pathway





Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FISUC_RS09415&oldid=94709"