Difference between revisions of "FSU RS07260"

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(Created page with "Category:reaction == Reaction ACONITATEHYDR-RXN == * common-name: ** cis-aconitate hydratase ** aconitate hydratase * direction: ** reversible == Reaction formula == * 1 [...")
(Created page with "Category:gene == Gene FSU_RS07260 == * common-name: ** nifh * transcription-direction: ** negative * centisome-position: ** 46.22246 * left-end-position: ** 1776331 *...")
 
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction ACONITATEHYDR-RXN ==
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== Gene FSU_RS07260 ==
 
* common-name:
 
* common-name:
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** cis-aconitate hydratase
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** nifh
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** aconitate hydratase
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* transcription-direction:
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* direction:
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** negative
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** reversible
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* centisome-position:
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== Reaction formula ==
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** 46.22246   
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* 1 [[CIS-ACONITATE]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[THREO-DS-ISO-CITRATE]][c]
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* left-end-position:
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== Gene(s) associated with this reaction  ==
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** 1776331
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* Gene: [[FISUC_RS00920]]
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* right-end-position:
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** 1777176
 +
== Organism(s) associated with this gene  ==
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* [[fsucgem]]
 +
== Reaction(s) associated ==
 +
* [[NITROGENASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
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* Gene: [[FSU_RS02800]]
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* [[RXN-20190]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) ==
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== Pathway(s) associated ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[N2FIX-PWY]]
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* [[GLYOXYLATE-BYPASS]], glyoxylate cycle:
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** '''1''' reactions found over '''1''' reactions in the full pathway
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** '''4''' reactions found over '''6''' reactions in the full pathway
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{{#set: common-name=nifh}}
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* [[PWY-6549]], L-glutamine biosynthesis III:
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{{#set: transcription-direction=negative}}
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** '''7''' reactions found over '''9''' reactions in the full pathway
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{{#set: centisome-position=46.22246    }}
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* [[PWY-6728]], methylaspartate cycle:
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{{#set: left-end-position=1776331}}
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** '''9''' reactions found over '''19''' reactions in the full pathway
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{{#set: right-end-position=1777176}}
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* [[P23-PWY]], reductive TCA cycle I:
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{{#set: organism associated=fsucgem}}
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** '''10''' reactions found over '''12''' reactions in the full pathway
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{{#set: nb reaction associated=2}}
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* [[PWY-7124]], ethylene biosynthesis V (engineered):
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{{#set: nb pathway associated=1}}
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** '''7''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY-5392]], reductive TCA cycle II:
 
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** '''8''' reactions found over '''12''' reactions in the full pathway
 
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* [[TCA]], TCA cycle I (prokaryotic):
 
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** '''9''' reactions found over '''10''' reactions in the full pathway
 
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* [[PWY-7254]], TCA cycle VII (acetate-producers):
 
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** '''8''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-5690]], TCA cycle II (plants and fungi):
 
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** '''8''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY66-398]], TCA cycle III (animals):
 
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** '''8''' reactions found over '''11''' reactions in the full pathway
 
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* [[PWY-5913]], partial TCA cycle (obligate autotrophs):
 
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** '''9''' reactions found over '''11''' reactions in the full pathway
 
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* [[REDCITCYC]], TCA cycle VIII (Helicobacter):
 
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** '''7''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-6969]], TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase):
 
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** '''9''' reactions found over '''12''' reactions in the full pathway
 
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* [[P105-PWY]], TCA cycle IV (2-oxoglutarate decarboxylase):
 
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** '''8''' reactions found over '''11''' reactions in the full pathway
 
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* [[FERMENTATION-PWY]], mixed acid fermentation:
 
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** '''14''' reactions found over '''16''' reactions in the full pathway
 
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</div>
 
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== Reconstruction information  ==
 
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* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== External links  ==
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22147 22147]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R01900 R01900]
 
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{{#set: common-name=aconitate hydratase|cis-aconitate hydratase}}
 
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{{#set: direction=reversible}}
 
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{{#set: nb gene associated=2}}
 
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{{#set: nb pathway associated=15}}
 
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{{#set: reconstruction category=annotation}}
 
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{{#set: reconstruction tool=pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=genome}}
 

Latest revision as of 11:21, 17 October 2022

Gene FSU_RS07260

  • common-name:
    • nifh
  • transcription-direction:
    • negative
  • centisome-position:
    • 46.22246
  • left-end-position:
    • 1776331
  • right-end-position:
    • 1777176

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • N2FIX-PWY
    • 1 reactions found over 1 reactions in the full pathway





Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS07260&oldid=94719"