Difference between revisions of "FSU RS13255"

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(Created page with "Category:reaction == Reaction HISTPRATPHYD-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.6.1.31 ec-3.6.1.31] * direction: ** left-to-right * common-name: ** phosph...")
(Created page with "Category:gene == Gene FSU_RS13255 == == Organism(s) associated with this gene == * fsucgem == Reaction(s) associated == * RXN-11832 ** Category: orthology ***...")
 
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction HISTPRATPHYD-RXN ==
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== Gene FSU_RS13255 ==
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* ec-number:
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== Organism(s) associated with this gene  ==
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** [http://enzyme.expasy.org/EC/3.6.1.31 ec-3.6.1.31]
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* [[fsucgem]]
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* direction:
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== Reaction(s) associated ==
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** left-to-right
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* [[RXN-11832]]
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* common-name:
 
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** phosphoribosyl-atp diphosphatase
 
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== Reaction formula ==
 
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* 1 [[PHOSPHORIBOSYL-ATP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PHOSPHORIBOSYL-AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 2 [[PROTON]][c]
 
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== Gene(s) associated with this reaction  ==
 
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* Gene: [[FISUC_RS05705]]
 
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** Category: [[annotation]]
 
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[FSU_RS01510]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
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*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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*** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
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*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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* [[RXN-12002]]
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*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
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* Gene: [[FSU_RS07605]]
 
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** Category: [[annotation]]
 
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
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*** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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*** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
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*** Source: [[plantarum]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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* [[RXN-7913]]
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== Pathway(s) ==
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** Category: [[orthology]]
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* [[HISTSYN-PWY]], L-histidine biosynthesis:
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*** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
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** '''10''' reactions found over '''10''' reactions in the full pathway
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== Pathway(s) associated ==
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== Reconstruction information  ==
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* [[PWY-7205]]
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* category: [[orthology]]; source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* category: [[orthology]]; source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
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* [[PWY-7176]]
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* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
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* [[PWY-7197]]
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* category: [[orthology]]; source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: organism associated=fsucgem}}
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== External links  ==
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{{#set: nb reaction associated=3}}
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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{{#set: nb pathway associated=3}}
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22829 22829]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R04035 R04035]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P44434 P44434]
 
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** [http://www.uniprot.org/uniprot/Q9X0C5 Q9X0C5]
 
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** [http://www.uniprot.org/uniprot/Q9PM71 Q9PM71]
 
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** [http://www.uniprot.org/uniprot/Q02130 Q02130]
 
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** [http://www.uniprot.org/uniprot/Q9RWD6 Q9RWD6]
 
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** [http://www.uniprot.org/uniprot/Q9K0J4 Q9K0J4]
 
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** [http://www.uniprot.org/uniprot/O34912 O34912]
 
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** [http://www.uniprot.org/uniprot/P0A5B1 P0A5B1]
 
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** [http://www.uniprot.org/uniprot/Q9KSW7 Q9KSW7]
 
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** [http://www.uniprot.org/uniprot/Q9HUB6 Q9HUB6]
 
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** [http://www.uniprot.org/uniprot/Q57750 Q57750]
 
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** [http://www.uniprot.org/uniprot/O27344 O27344]
 
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** [http://www.uniprot.org/uniprot/Q9JVJ9 Q9JVJ9]
 
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** [http://www.uniprot.org/uniprot/O67780 O67780]
 
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** [http://www.uniprot.org/uniprot/Q9PBD1 Q9PBD1]
 
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** [http://www.uniprot.org/uniprot/P26722 P26722]
 
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** [http://www.uniprot.org/uniprot/P45353 P45353]
 
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** [http://www.uniprot.org/uniprot/Q12670 Q12670]
 
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** [http://www.uniprot.org/uniprot/P50935 P50935]
 
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** [http://www.uniprot.org/uniprot/P00815 P00815]
 
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** [http://www.uniprot.org/uniprot/P07685 P07685]
 
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** [http://www.uniprot.org/uniprot/O59667 O59667]
 
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** [http://www.uniprot.org/uniprot/O82768 O82768]
 
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** [http://www.uniprot.org/uniprot/P10367 P10367]
 
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** [http://www.uniprot.org/uniprot/P06989 P06989]
 
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</div>
 
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{{#set: ec-number=ec-3.6.1.31}}
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=phosphoribosyl-atp diphosphatase}}
 
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{{#set: nb gene associated=3}}
 
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{{#set: nb pathway associated=1}}
 
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{{#set: reconstruction category=orthology|annotation}}
 
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{{#set: reconstruction tool=pathwaytools|orthofinder}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=ecoli|faecalibacterium|bthetaiotaomicron|plantarum|genome|bifidobacterium}}
 

Latest revision as of 11:21, 17 October 2022

Gene FSU_RS13255

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7205
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7176
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7197
    • 4 reactions found over 4 reactions in the full pathway


Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS13255&oldid=94728"