Difference between revisions of "FSU RS13255"

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(Created page with "Category:reaction == Reaction THREONINE--TRNA-LIGASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/6.1.1.3 ec-6.1.1.3] * direction: ** left-to-right * common-name: *...")
(Created page with "Category:gene == Gene FSU_RS13255 == == Organism(s) associated with this gene == * fsucgem == Reaction(s) associated == * RXN-11832 ** Category: orthology ***...")
 
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction THREONINE--TRNA-LIGASE-RXN ==
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== Gene FSU_RS13255 ==
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* ec-number:
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== Organism(s) associated with this gene  ==
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** [http://enzyme.expasy.org/EC/6.1.1.3 ec-6.1.1.3]
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* [[fsucgem]]
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* direction:
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== Reaction(s) associated ==
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** left-to-right
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* [[RXN-11832]]
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* common-name:
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** Category: [[orthology]]
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** threonine--trna ligase
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*** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
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== Reaction formula ==
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* [[RXN-12002]]
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* 1 [[ATP]][c] '''+''' 1 [[THR]][c] '''+''' 1 [[THR-tRNAs]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-THR-tRNAs]][c] '''+''' 1 [[PPI]][c]
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** Category: [[orthology]]
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== Gene(s) associated with this reaction  ==
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*** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
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* Gene: [[FSU_RS12440]]
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* [[RXN-7913]]
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** Category: [[annotation]]
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** Category: [[orthology]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
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* Gene: [[FISUC_RS10475]]
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== Pathway(s) associated ==
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** Category: [[annotation]]
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* [[PWY-7205]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Pathway(s) ==
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* [[PWY-7176]]
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* [[TRNA-CHARGING-PWY]], tRNA charging:
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** '''3''' reactions found over '''3''' reactions in the full pathway
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** '''21''' reactions found over '''21''' reactions in the full pathway
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* [[PWY-7197]]
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== Reconstruction information  ==
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: organism associated=fsucgem}}
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== External links  ==
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{{#set: nb reaction associated=3}}
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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{{#set: nb pathway associated=3}}
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24625 24625]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R03663 R03663]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/O83809 O83809]
 
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** [http://www.uniprot.org/uniprot/Q9JVA3 Q9JVA3]
 
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** [http://www.uniprot.org/uniprot/P56071 P56071]
 
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** [http://www.uniprot.org/uniprot/O58430 O58430]
 
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** [http://www.uniprot.org/uniprot/P47615 P47615]
 
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** [http://www.uniprot.org/uniprot/O05947 O05947]
 
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** [http://www.uniprot.org/uniprot/Q9PIS3 Q9PIS3]
 
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** [http://www.uniprot.org/uniprot/O67583 O67583]
 
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** [http://www.uniprot.org/uniprot/O27504 O27504]
 
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** [http://www.uniprot.org/uniprot/O51662 O51662]
 
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** [http://www.uniprot.org/uniprot/Q9ZMV3 Q9ZMV3]
 
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** [http://www.uniprot.org/uniprot/Q9Z7A0 Q9Z7A0]
 
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** [http://www.uniprot.org/uniprot/Q9WZJ9 Q9WZJ9]
 
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** [http://www.uniprot.org/uniprot/Q9CED2 Q9CED2]
 
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** [http://www.uniprot.org/uniprot/P43014 P43014]
 
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** [http://www.uniprot.org/uniprot/P46244 P46244]
 
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** [http://www.uniprot.org/uniprot/P75225 P75225]
 
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** [http://www.uniprot.org/uniprot/Q48989 Q48989]
 
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** [http://www.uniprot.org/uniprot/P0A8M3 P0A8M3]
 
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** [http://www.uniprot.org/uniprot/O04630 O04630]
 
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** [http://www.uniprot.org/uniprot/P18255 P18255]
 
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** [http://www.uniprot.org/uniprot/P18256 P18256]
 
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** [http://www.uniprot.org/uniprot/P04801 P04801]
 
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** [http://www.uniprot.org/uniprot/P07236 P07236]
 
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** [http://www.uniprot.org/uniprot/P26639 P26639]
 
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</div>
 
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{{#set: ec-number=ec-6.1.1.3}}
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=threonine--trna ligase}}
 
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{{#set: nb gene associated=2}}
 
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{{#set: nb pathway associated=1}}
 
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{{#set: reconstruction category=annotation}}
 
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{{#set: reconstruction tool=pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=genome}}
 

Latest revision as of 11:21, 17 October 2022

Gene FSU_RS13255

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7205
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7176
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7197
    • 4 reactions found over 4 reactions in the full pathway


Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS13255&oldid=94728"