Difference between revisions of "FISUC RS12100"

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(Created page with "Category:reaction == Reaction 2-METHYLCITRATE-DEHYDRATASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/4.2.1.79 ec-4.2.1.79] * direction: ** reversible == Reaction...")
(Created page with "Category:gene == Gene FISUC_RS12100 == * common-name: ** trmd * transcription-direction: ** negative * centisome-position: ** 77.41839 * left-end-position: ** 2974906...")
 
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction 2-METHYLCITRATE-DEHYDRATASE-RXN ==
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== Gene FISUC_RS12100 ==
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* ec-number:
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* common-name:
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** [http://enzyme.expasy.org/EC/4.2.1.79 ec-4.2.1.79]
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** trmd
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* direction:
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* transcription-direction:
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** reversible
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** negative
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== Reaction formula ==
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* centisome-position:
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* 1 [[CPD-622]][c] '''<=>''' 1 [[CPD-1136]][c] '''+''' 1 [[WATER]][c]
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** 77.41839   
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== Gene(s) associated with this reaction  ==
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* left-end-position:
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* Gene: [[FSU_RS15360]]
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** 2974906
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** Category: [[manual]]
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* right-end-position:
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*** Source: [[reactions_add_147_emile_annot]], Tool: [[unknown-tool]], Assignment: n.a, Comment: present in the annotation part of the emile network.
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** 2975610
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== Pathway(s) ==
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== Organism(s) associated with this gene  ==
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* [[PWY0-42]], 2-methylcitrate cycle I:
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* [[fsucgem]]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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== Reaction(s) associated ==
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== Reconstruction information  ==
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* [[RXN-12458]]
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* category: [[manual]]; source: [[reactions_add_147_emile_annot]]; tool: [[curation]]; comment: present in the annotation part of the emile network.
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** Category: [[annotation]]
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== External links  ==
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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* RHEA:
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* [[RXN-14517]]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17728 17728]
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** Category: [[annotation]]
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* LIGAND-RXN:
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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** [http://www.genome.jp/dbget-bin/www_bget?R04424 R04424]
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== Pathway(s) associated ==
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{{#set: ec-number=ec-4.2.1.79}}
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* [[PWY-7285]]
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{{#set: direction=reversible}}
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** '''1''' reactions found over '''4''' reactions in the full pathway
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{{#set: nb gene associated=1}}
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* [[PWY-7286]]
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{{#set: nb pathway associated=1}}
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** '''1''' reactions found over '''4''' reactions in the full pathway
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{{#set: reconstruction category=manual}}
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* [[PWY-6829]]
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{{#set: reconstruction tool=curation}}
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** '''1''' reactions found over '''15''' reactions in the full pathway
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{{#set: reconstruction comment=present in the annotation part of the emile network.}}
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{{#set: common-name=trmd}}
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{{#set: reconstruction source=reactions_add_147_emile_annot}}
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{{#set: transcription-direction=negative}}
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{{#set: centisome-position=77.41839    }}
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{{#set: left-end-position=2974906}}
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{{#set: right-end-position=2975610}}
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{{#set: organism associated=fsucgem}}
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{{#set: nb reaction associated=2}}
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{{#set: nb pathway associated=3}}

Latest revision as of 11:22, 17 October 2022

Gene FISUC_RS12100

  • common-name:
    • trmd
  • transcription-direction:
    • negative
  • centisome-position:
    • 77.41839
  • left-end-position:
    • 2974906
  • right-end-position:
    • 2975610

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7285
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-7286
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-6829
    • 1 reactions found over 15 reactions in the full pathway





Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FISUC_RS12100&oldid=94763"