Difference between revisions of "3.1.4.44-RXN"

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(Created page with "Category:reaction == Reaction RXN-12398 == * common-name: ** xyloglucan xxlg oligosaccharide β-galactosidase * ec-number: ** [http://enzyme.expasy.org/EC/3.2.1.23 ec-...")
(Created page with "Category:reaction == Reaction 3.1.4.44-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.1.4.44 ec-3.1.4.44] * direction: ** left-to-right == Reaction formula == * 1 [...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction RXN-12398 ==
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== Reaction 3.1.4.44-RXN ==
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* common-name:
 
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** xyloglucan xxlg oligosaccharide β-galactosidase
 
 
* ec-number:
 
* ec-number:
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** [http://enzyme.expasy.org/EC/3.2.1.23 ec-3.2.1.23]
+
** [http://enzyme.expasy.org/EC/3.1.4.44 ec-3.1.4.44]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[CPD-13376]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-13375]][c] '''+''' 1 [[D-galactopyranose]][c]
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* 1 [[CPD-541]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GLYCEROL-3P]][c] '''+''' 1 [[MYO-INOSITOL]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[FSU_RS10865]]
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* Gene: [[FSU_RS06790]]
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** Category: [[manual]]
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** Category: [[orthology]]
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*** Source: [[add_expert_reactions]], Tool: [[unknown-tool]], Assignment: n.a, Comment: added to improve flux in sugars
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*** Source: [[plantarum]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PWY-6807]], xyloglucan degradation II (exoglucanase):
 
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** '''5''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
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* category: [[manual]]; source: [[add_expert_reactions]]; tool: [[curation]]; comment: present in the annotation part in the first version of the fibrobacter gem
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* category: [[orthology]]; source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
 
== External links  ==
 
== External links  ==
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{{#set: common-name=xyloglucan xxlg oligosaccharide β-galactosidase}}
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* RHEA:
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{{#set: ec-number=ec-3.2.1.23}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16502 16502]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01193 R01193]
 +
{{#set: ec-number=ec-3.1.4.44}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
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{{#set: nb pathway associated=1}}
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{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=manual}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=curation}}
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{{#set: reconstruction tool=orthofinder}}
−
{{#set: reconstruction comment=present in the annotation part in the first version of the fibrobacter gem}}
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{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=add_expert_reactions}}
+
{{#set: reconstruction source=plantarum}}

Latest revision as of 11:16, 17 October 2022

Reaction 3.1.4.44-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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