Difference between revisions of "RXN-12346"

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(Created page with "Category:reaction == Reaction MANNPGUANYLTRANGDP-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.7.7.22 ec-2.7.7.22] * direction: ** reversible == Reaction formula =...")
(Created page with "Category:reaction == Reaction RXN-12346 == * ec-number: ** [http://enzyme.expasy.org/EC/3.2.2.30 ec-3.2.2.30] * direction: ** left-to-right == Reaction formula == * 1 CP...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction MANNPGUANYLTRANGDP-RXN ==
+
== Reaction RXN-12346 ==
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.7.7.22 ec-2.7.7.22]
+
** [http://enzyme.expasy.org/EC/3.2.2.30 ec-3.2.2.30]
 
* direction:
 
* direction:
** reversible
+
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[GDP]][c] '''+''' 1 [[MANNOSE-1P]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[GDP-MANNOSE]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[CPD-13324]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ADENINE]][c] '''+''' 1 [[CPD-10484]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[FSU_RS05775]]
 
** Category: [[manual]]
 
*** Source: [[add_expert_reactions]], Tool: [[unknown-tool]], Assignment: n.a, Comment: added to improve flux in sugars
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7371]], 1,4-dihydroxy-6-naphthoate biosynthesis II:
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[manual]]; source: [[add_expert_reactions]]; tool: [[curation]]; comment: present in the orthology part in the first version of the fibrobacter gem
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* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_spontaneous]]; tool: [[meneco]]; comment: added for gapfilling
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12905 12905]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33080 33080]
* LIGAND-RXN:
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{{#set: ec-number=ec-3.2.2.30}}
** [http://www.genome.jp/dbget-bin/www_bget?R00883 R00883]
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{{#set: direction=left-to-right}}
* UNIPROT:
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{{#set: nb gene associated=0}}
** [http://www.uniprot.org/uniprot/P07874 P07874]
+
{{#set: nb pathway associated=1}}
** [http://www.uniprot.org/uniprot/P24174 P24174]
+
{{#set: reconstruction category=gap-filling}}
{{#set: ec-number=ec-2.7.7.22}}
+
{{#set: reconstruction tool=meneco}}
{{#set: direction=reversible}}
+
{{#set: reconstruction comment=added for gapfilling}}
{{#set: nb gene associated=1}}
+
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_spontaneous}}
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=manual}}
 
{{#set: reconstruction tool=curation}}
 
{{#set: reconstruction comment=present in the orthology part in the first version of the fibrobacter gem}}
 
{{#set: reconstruction source=add_expert_reactions}}
 

Latest revision as of 11:17, 17 October 2022

Reaction RXN-12346

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7371, 1,4-dihydroxy-6-naphthoate biosynthesis II:
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links