Difference between revisions of "GARTRANSFORMYL2-RXN"
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(Created page with "Category:reaction == Reaction RXN-10911 == * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.1 ec-1.1.1.1] * direction: ** left-to-right * synonymous: ** 3,4-dihydroxyphe...") |
(Created page with "Category:reaction == Reaction GARTRANSFORMYL2-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.1.2 ec-2.1.2] * direction: ** left-to-right == Reaction formula == * 1...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction RXN | + | == Reaction GARTRANSFORMYL2-RXN == |
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/2.1.2 ec-2.1.2] |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
| − | |||
| − | |||
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[5-PHOSPHO-RIBOSYL-GLYCINEAMIDE]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[FORMATE]][c] '''=>''' 1 [[5-P-RIBOSYL-N-FORMYLGLYCINEAMIDE]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[FSU_RS04650]] |
| − | ** Category: [[ | + | ** Category: [[orthology]] |
| − | *** Source: [[ | + | *** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a |
| + | *** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a | ||
| + | *** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| − | * [[PWY- | + | * [[PWY-6277]], superpathway of 5-aminoimidazole ribonucleotide biosynthesis: |
| − | ** ''' | + | ** '''7''' reactions found over '''5''' reactions in the full pathway |
| + | * [[PWY-6122]], 5-aminoimidazole ribonucleotide biosynthesis II: | ||
| + | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * category: [[ | + | * category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a |
| + | * category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a | ||
| + | * category: [[orthology]]; source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24830 24830] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
| − | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R06974 R06974] |
| − | {{#set: ec-number=ec- | + | {{#set: ec-number=ec-2.1.2}} |
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | |||
{{#set: nb gene associated=1}} | {{#set: nb gene associated=1}} | ||
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=2}} |
| − | {{#set: reconstruction category= | + | {{#set: reconstruction category=orthology}} |
| − | {{#set: reconstruction tool= | + | {{#set: reconstruction tool=orthofinder}} |
| − | {{#set: reconstruction comment= | + | {{#set: reconstruction comment=n.a}} |
| − | {{#set: reconstruction source= | + | {{#set: reconstruction source=bifidobacterium|ecoli|bthetaiotaomicron}} |
Latest revision as of 11:17, 17 October 2022
Contents
Reaction GARTRANSFORMYL2-RXN
- ec-number:
- direction:
- left-to-right
Reaction formula
- 1 5-PHOSPHO-RIBOSYL-GLYCINEAMIDE[c] + 1 ATP[c] + 1 FORMATE[c] => 1 5-P-RIBOSYL-N-FORMYLGLYCINEAMIDE[c] + 1 ADP[c] + 1 PROTON[c] + 1 Pi[c]
Gene(s) associated with this reaction
- Gene: FSU_RS04650
- Category: orthology
- Source: ecoli, Tool: orthofinder, Assignment: n.a, Comment: n.a
- Source: bifidobacterium, Tool: orthofinder, Assignment: n.a, Comment: n.a
- Source: bthetaiotaomicron, Tool: orthofinder, Assignment: n.a, Comment: n.a
- Category: orthology
Pathway(s)
- PWY-6277, superpathway of 5-aminoimidazole ribonucleotide biosynthesis:
- 7 reactions found over 5 reactions in the full pathway
- PWY-6122, 5-aminoimidazole ribonucleotide biosynthesis II:
- 5 reactions found over 5 reactions in the full pathway
Reconstruction information
- category: orthology; source: bthetaiotaomicron; tool: orthofinder; comment: n.a
- category: orthology; source: ecoli; tool: orthofinder; comment: n.a
- category: orthology; source: bifidobacterium; tool: orthofinder; comment: n.a
External links
