Difference between revisions of "S-ADENMETSYN-RXN"

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(Created page with "Category:reaction == Reaction 3.2.2.22-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.2.2.22 ec-3.2.2.22] * direction: ** left-to-right * common-name: ** ricin doma...")
(Created page with "Category:reaction == Reaction S-ADENMETSYN-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1.6 ec-2.5.1.6] * direction: ** left-to-right * common-name: ** methioni...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 3.2.2.22-RXN ==
+
== Reaction S-ADENMETSYN-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.2.2.22 ec-3.2.2.22]
+
** [http://enzyme.expasy.org/EC/2.5.1.6 ec-2.5.1.6]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** ricin domain-containing protein
+
** methionine adenosyltransferase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[28S-rRNAs]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[28S-rRNA-Fragments]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[MET]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS15805]]
+
* Gene: [[FISUC_RS13990]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
+
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[FISUC_RS15855]]
+
* Gene: [[FSU_RS00180]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
+
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
*** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
*** Source: [[plantarum]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[METHIONINE-DEG1-PWY]], L-methionine degradation I (to L-homocysteine):
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5041]], S-adenosyl-L-methionine cycle II:
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[SAM-PWY]], S-adenosyl-L-methionine biosynthesis:
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[ETHYL-PWY]], ethylene biosynthesis I (plants):
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5912]], 2'-deoxymugineic acid phytosiderophore biosynthesis:
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[orthology]]; source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[orthology]]; source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[annotation]]; source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[annotation]]; source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21081 21081]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00177 R00177]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q8X696 Q8X696]
+
** [http://www.uniprot.org/uniprot/P19358 P19358]
−
** [http://www.uniprot.org/uniprot/P21326 P21326]
+
** [http://www.uniprot.org/uniprot/P18298 P18298]
−
** [http://www.uniprot.org/uniprot/Q38760 Q38760]
+
** [http://www.uniprot.org/uniprot/Q91X83 Q91X83]
−
** [http://www.uniprot.org/uniprot/P24817 P24817]
+
** [http://www.uniprot.org/uniprot/Q9PNJ8 Q9PNJ8]
−
** [http://www.uniprot.org/uniprot/P33186 P33186]
+
** [http://www.uniprot.org/uniprot/P54419 P54419]
−
** [http://www.uniprot.org/uniprot/P04399 P04399]
+
** [http://www.uniprot.org/uniprot/P56460 P56460]
−
** [http://www.uniprot.org/uniprot/P06750 P06750]
+
** [http://www.uniprot.org/uniprot/Q9JVV6 Q9JVV6]
−
** [http://www.uniprot.org/uniprot/P02879 P02879]
+
** [http://www.uniprot.org/uniprot/Q9CEE0 Q9CEE0]
−
** [http://www.uniprot.org/uniprot/P16094 P16094]
+
** [http://www.uniprot.org/uniprot/O50163 O50163]
−
** [http://www.uniprot.org/uniprot/P27559 P27559]
+
** [http://www.uniprot.org/uniprot/P43762 P43762]
−
** [http://www.uniprot.org/uniprot/P09989 P09989]
+
** [http://www.uniprot.org/uniprot/P23686 P23686]
−
** [http://www.uniprot.org/uniprot/P28522 P28522]
+
** [http://www.uniprot.org/uniprot/P17562 P17562]
−
** [http://www.uniprot.org/uniprot/P16093 P16093]
+
** [http://www.uniprot.org/uniprot/Q7M4Y8 Q7M4Y8]
−
** [http://www.uniprot.org/uniprot/P10593 P10593]
+
** [http://www.uniprot.org/uniprot/Q9S992 Q9S992]
−
** [http://www.uniprot.org/uniprot/P20656 P20656]
+
** [http://www.uniprot.org/uniprot/Q90862 Q90862]
−
** [http://www.uniprot.org/uniprot/Q41143 Q41143]
+
** [http://www.uniprot.org/uniprot/P13444 P13444]
−
** [http://www.uniprot.org/uniprot/P20655 P20655]
+
** [http://www.uniprot.org/uniprot/P31153 P31153]
−
** [http://www.uniprot.org/uniprot/Q41776 Q41776]
+
** [http://www.uniprot.org/uniprot/Q00266 Q00266]
−
** [http://www.uniprot.org/uniprot/Q41777 Q41777]
+
** [http://www.uniprot.org/uniprot/P43281 P43281]
−
** [http://www.uniprot.org/uniprot/P28590 P28590]
+
** [http://www.uniprot.org/uniprot/P40320 P40320]
−
** [http://www.uniprot.org/uniprot/P98185 P98185]
+
** [http://www.uniprot.org/uniprot/P43280 P43280]
−
** [http://www.uniprot.org/uniprot/P27561 P27561]
+
** [http://www.uniprot.org/uniprot/P43282 P43282]
−
** [http://www.uniprot.org/uniprot/P33185 P33185]
+
** [http://www.uniprot.org/uniprot/P48498 P48498]
−
** [http://www.uniprot.org/uniprot/P24476 P24476]
+
** [http://www.uniprot.org/uniprot/P10659 P10659]
−
** [http://www.uniprot.org/uniprot/P24475 P24475]
+
** [http://www.uniprot.org/uniprot/Q39465 Q39465]
−
** [http://www.uniprot.org/uniprot/P24477 P24477]
+
** [http://www.uniprot.org/uniprot/P48466 P48466]
−
** [http://www.uniprot.org/uniprot/Q05148 Q05148]
+
** [http://www.uniprot.org/uniprot/P49612 P49612]
−
** [http://www.uniprot.org/uniprot/P10297 P10297]
+
** [http://www.uniprot.org/uniprot/P49613 P49613]
−
** [http://www.uniprot.org/uniprot/P27560 P27560]
+
** [http://www.uniprot.org/uniprot/P78003 P78003]
−
** [http://www.uniprot.org/uniprot/Q00465 Q00465]
+
** [http://www.uniprot.org/uniprot/Q49070 Q49070]
−
** [http://www.uniprot.org/uniprot/P29339 P29339]
+
** [http://www.uniprot.org/uniprot/P0A817 P0A817]
−
** [http://www.uniprot.org/uniprot/Q03464 Q03464]
+
** [http://www.uniprot.org/uniprot/P50299 P50299]
−
** [http://www.uniprot.org/uniprot/Q41389 Q41389]
+
** [http://www.uniprot.org/uniprot/O22350 O22350]
−
** [http://www.uniprot.org/uniprot/Q41391 Q41391]
+
** [http://www.uniprot.org/uniprot/P24260 P24260]
−
** [http://www.uniprot.org/uniprot/Q06077 Q06077]
+
** [http://www.uniprot.org/uniprot/O60198 O60198]
−
** [http://www.uniprot.org/uniprot/Q06076 Q06076]
+
** [http://www.uniprot.org/uniprot/Q12642 Q12642]
−
** [http://www.uniprot.org/uniprot/P33183 P33183]
 
−
** [http://www.uniprot.org/uniprot/Q7M1J0 Q7M1J0]
 
−
** [http://www.uniprot.org/uniprot/Q7M1I9 Q7M1I9]
 
−
** [http://www.uniprot.org/uniprot/Q7M1I8 Q7M1I8]
 
−
** [http://www.uniprot.org/uniprot/Q7M1I7 Q7M1I7]
 
−
** [http://www.uniprot.org/uniprot/P34967 P34967]
 
−
** [http://www.uniprot.org/uniprot/Q7M1L7 Q7M1L7]
 
−
** [http://www.uniprot.org/uniprot/Q7M1L6 Q7M1L6]
 
−
** [http://www.uniprot.org/uniprot/Q41851 Q41851]
 
−
** [http://www.uniprot.org/uniprot/P93261 P93261]
 
−
** [http://www.uniprot.org/uniprot/P11140 P11140]
 
 
</div>
 
</div>
−
{{#set: ec-number=ec-3.2.2.22}}
+
{{#set: ec-number=ec-2.5.1.6}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=ricin domain-containing protein}}
+
{{#set: common-name=methionine adenosyltransferase}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=5}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=orthofinder|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=fibrobacter_succinogenes2|fibrobacter_succinogenes1}}
+
{{#set: reconstruction source=ecoli|bifidobacterium|plantarum|bthetaiotaomicron|fibrobacter_succinogenes2|faecalibacterium|fibrobacter_succinogenes1}}

Latest revision as of 11:17, 17 October 2022

Reaction S-ADENMETSYN-RXN

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • methionine adenosyltransferase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • METHIONINE-DEG1-PWY, L-methionine degradation I (to L-homocysteine):
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-5041, S-adenosyl-L-methionine cycle II:
    • 4 reactions found over 4 reactions in the full pathway
  • SAM-PWY, S-adenosyl-L-methionine biosynthesis:
    • 1 reactions found over 1 reactions in the full pathway
  • ETHYL-PWY, ethylene biosynthesis I (plants):
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-5912, 2'-deoxymugineic acid phytosiderophore biosynthesis:
    • 1 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=S-ADENMETSYN-RXN&oldid=92905"