Difference between revisions of "AMINOLEVULINATE-AMINOTRANSFERASE-RXN"

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(Created page with "Category:reaction == Reaction FORMYLTHFDEFORMYL-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.5.1.10 ec-3.5.1.10] * direction: ** left-to-right * common-name: ** f...")
(Created page with "Category:reaction == Reaction AMINOLEVULINATE-AMINOTRANSFERASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.6.1.43 ec-2.6.1.43] * direction: ** reversible == Reac...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction FORMYLTHFDEFORMYL-RXN ==
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== Reaction AMINOLEVULINATE-AMINOTRANSFERASE-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.5.1.10 ec-3.5.1.10]
+
** [http://enzyme.expasy.org/EC/2.6.1.43 ec-2.6.1.43]
 
* direction:
 
* direction:
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** left-to-right
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** reversible
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* common-name:
 
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** formyltetrahydrofolate deformylase
 
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[FORMYL-THF-GLU-N]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[FORMATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[THF-GLU-N]][c]
+
* 1 [[5-AMINO-LEVULINATE]][c] '''+''' 1 [[PYRUVATE]][c] '''<=>''' 1 [[CPD-473]][c] '''+''' 1 [[L-ALPHA-ALANINE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS04200]]
 
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** Category: [[annotation]]
 
−
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[FISUC_RS02310]]
 
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** Category: [[annotation]]
 
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*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PWY-2201]], folate transformations I:
 
−
** '''9''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-7909]], formaldehyde oxidation VII (THF pathway):
 
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** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5497]], purine nucleobases degradation II (anaerobic):
 
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** '''8''' reactions found over '''24''' reactions in the full pathway
 
−
* [[P164-PWY]], purine nucleobases degradation I (anaerobic):
 
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** '''3''' reactions found over '''17''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_spontaneous]]; tool: [[meneco]]; comment: added for gapfilling
−
* category: [[annotation]]; source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19834 19834]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12483 12483]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R00944 R00944]
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** [http://www.genome.jp/dbget-bin/www_bget?R02271 R02271]
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* UNIPROT:
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{{#set: ec-number=ec-2.6.1.43}}
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** [http://www.uniprot.org/uniprot/P37051 P37051]
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{{#set: direction=reversible}}
−
** [http://www.uniprot.org/uniprot/Q03432 Q03432]
+
{{#set: nb gene associated=0}}
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** [http://www.uniprot.org/uniprot/Q9PPC9 Q9PPC9]
+
{{#set: nb pathway associated=0}}
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** [http://www.uniprot.org/uniprot/Q46339 Q46339]
+
{{#set: reconstruction category=gap-filling}}
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** [http://www.uniprot.org/uniprot/Q9X7F7 Q9X7F7]
+
{{#set: reconstruction tool=meneco}}
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{{#set: ec-number=ec-3.5.1.10}}
+
{{#set: reconstruction comment=added for gapfilling}}
−
{{#set: direction=left-to-right}}
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{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_spontaneous}}
−
{{#set: common-name=formyltetrahydrofolate deformylase}}
 
−
{{#set: nb gene associated=2}}
 
−
{{#set: nb pathway associated=4}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=fibrobacter_succinogenes2|fibrobacter_succinogenes1}}
 

Latest revision as of 11:17, 17 October 2022

Reaction AMINOLEVULINATE-AMINOTRANSFERASE-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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