Difference between revisions of "2.4.1.129-RXN"

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(Created page with "Category:reaction == Reaction 2-METHYLCITRATE-DEHYDRATASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/4.2.1.79 ec-4.2.1.79] * direction: ** reversible == Reaction...")
(Created page with "Category:reaction == Reaction 2.4.1.129-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.4.1.129 ec-2.4.1.129] * direction: ** left-to-right * common-name: ** peptido...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 2-METHYLCITRATE-DEHYDRATASE-RXN ==
+
== Reaction 2.4.1.129-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.2.1.79 ec-4.2.1.79]
+
** [http://enzyme.expasy.org/EC/2.4.1.129 ec-2.4.1.129]
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 +
* common-name:
 +
** peptidoglycan glycosyltransferase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-622]][c] '''<=>''' 1 [[CPD-1136]][c] '''+''' 1 [[WATER]][c]
+
* 2 [[C6]][c] '''=>''' 1 [[C6]][c] '''+''' 1 [[UNDECAPRENYL-DIPHOSPHATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS15360]]
+
* Gene: [[FSU_RS08125]]
−
** Category: [[manual]]
+
** Category: [[annotation]]
−
*** Source: [[add_expert_reactions]], Tool: [[unknown-tool]], Assignment: n.a, Comment: added to improve flux in sugars
+
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[FISUC_RS06230]]
 +
** Category: [[annotation]]
 +
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY0-42]], 2-methylcitrate cycle I:
+
* [[PWY-6385]], peptidoglycan biosynthesis III (mycobacteria):
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
** '''4''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[add_expert_reactions]]; tool: [[curation]]; comment: present in the annotation part in the first version of the fibrobacter gem
+
* category: [[annotation]]; source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[annotation]]; source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17728 17728]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23709 23709]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04424 R04424]
+
** [http://www.genome.jp/dbget-bin/www_bget?R06178 R06178]
−
{{#set: ec-number=ec-4.2.1.79}}
+
{{#set: ec-number=ec-2.4.1.129}}
−
{{#set: direction=reversible}}
+
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=1}}
+
{{#set: common-name=peptidoglycan glycosyltransferase}}
 +
{{#set: nb gene associated=2}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=manual}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=curation}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction comment=present in the annotation part in the first version of the fibrobacter gem}}
+
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=add_expert_reactions}}
+
{{#set: reconstruction source=fibrobacter_succinogenes2|fibrobacter_succinogenes1}}

Latest revision as of 11:18, 17 October 2022

Reaction 2.4.1.129-RXN

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • peptidoglycan glycosyltransferase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6385, peptidoglycan biosynthesis III (mycobacteria):
    • 4 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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