Difference between revisions of "FISUC RS13990"

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(Created page with "Category:gene == Gene FSU_RS13425 == * transcription-direction: ** positive * centisome-position: ** 84.64709 * left-end-position: ** 3252991 * right-end-position: **...")
(Created page with "Category:gene == Gene FISUC_RS13990 == * transcription-direction: ** negative * centisome-position: ** 89.420876 * left-end-position: ** 3436118 * right-end-position:...")
 
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene FSU_RS13425 ==
+
== Gene FISUC_RS13990 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* centisome-position:
 
* centisome-position:
−
** 84.64709    
+
** 89.420876    
 
* left-end-position:
 
* left-end-position:
−
** 3252991
+
** 3436118
 
* right-end-position:
 
* right-end-position:
−
** 3254076
+
** 3437326
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[fsucgem]]
 
* [[fsucgem]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[HISTAMINOTRANS-RXN]]
+
* [[S-ADENMETSYN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
−
*** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
 
−
*** source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
 
−
*** source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
 
−
*** source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 
−
* [[TYROSINE-AMINOTRANSFERASE-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
 
−
*** source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
 
−
*** source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[METHIONINE-DEG1-PWY]]
−
* [[HISTSYN-PWY]]
 
−
** '''10''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-3581]]
 
−
** '''2''' reactions found over '''11''' reactions in the full pathway
 
−
* [[TYRSYN]]
 
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-5048]]
+
* [[PWY-5041]]
−
** '''1''' reactions found over '''10''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-5886]]
+
* [[SAM-PWY]]
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-8016]]
+
* [[ETHYL-PWY]]
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY3O-4108]]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5151]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[TYRFUMCAT-PWY]]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7514]]
 
 
** '''1''' reactions found over '''3''' reactions in the full pathway
 
** '''1''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7518]]
+
* [[PWY-5912]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-5754]]
+
{{#set: transcription-direction=negative}}
−
** '''1''' reactions found over '''5''' reactions in the full pathway
+
{{#set: centisome-position=89.420876   }}
−
</div>
+
{{#set: left-end-position=3436118}}
−
{{#set: transcription-direction=positive}}
+
{{#set: right-end-position=3437326}}
−
{{#set: centisome-position=84.64709   }}
 
−
{{#set: left-end-position=3252991}}
 
−
{{#set: right-end-position=3254076}}
 
 
{{#set: organism associated=fsucgem}}
 
{{#set: organism associated=fsucgem}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=12}}
+
{{#set: nb pathway associated=5}}

Latest revision as of 11:21, 17 October 2022

Gene FISUC_RS13990

  • transcription-direction:
    • negative
  • centisome-position:
    • 89.420876
  • left-end-position:
    • 3436118
  • right-end-position:
    • 3437326

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • METHIONINE-DEG1-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-5041
    • 4 reactions found over 4 reactions in the full pathway
  • SAM-PWY
    • 1 reactions found over 1 reactions in the full pathway
  • ETHYL-PWY
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-5912
    • 1 reactions found over 4 reactions in the full pathway




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FISUC_RS13990&oldid=94626"