Difference between revisions of "Gap-filling"

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(Created page with "Category:pathway == Pathway PWY-4702 == * common-name: ** phytate degradation i * taxonomic-range: ** tax-33090 == Reaction(s) found == * RXN-7253 * RXN0-5408 == R...")
(Created page with "{{#ask: Category:reaction reconstruction category::gap-filling | ?common-name | ?ec-number | ?reconstruction tool | ?reconstruction source | ?reconstruction comment |...")
 
(14 intermediate revisions by 3 users not shown)
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[[Category:pathway]]
+
{{#ask: [[Category:reaction]] [[reconstruction category::gap-filling]]
== Pathway PWY-4702 ==
+
| ?common-name
* common-name:
+
| ?ec-number
** phytate degradation i
+
| ?reconstruction tool
* taxonomic-range:
+
| ?reconstruction source
** tax-33090
+
| ?reconstruction comment
== Reaction(s) found ==
+
| ?nb gene associated
* [[RXN-7253]]
+
| ?nb pathway associated
* [[RXN0-5408]]
+
}}
== Reaction(s) not found ==
 
* [NoneRXN-7251 RXN-7251]
 
* [NoneRXN-7249 RXN-7249]
 
* [NoneRXN0-1001 RXN0-1001]
 
* [NoneRXN-7248 RXN-7248]
 
* [NoneRXN-7245 RXN-7245]
 
* [NoneRXN-7246 RXN-7246]
 
* [NoneRXN-7247 RXN-7247]
 
* [NoneRXN-7243 RXN-7243]
 
* [NoneRXN-7242 RXN-7242]
 
* [NoneRXN-7241 RXN-7241]
 
* [NoneRXN-7244 RXN-7244]
 
* [NoneRXN-7250 RXN-7250]
 
{{#set: common-name=phytate degradation i}}
 
{{#set: taxonomic-range=tax-33090}}
 
{{#set: nb reaction found=2}}
 
{{#set: completion rate=0.14}}
 
{{#set: nb total reaction=14}}
 

Latest revision as of 11:09, 17 October 2022

 Common-nameEc-numberReconstruction toolReconstruction sourceReconstruction commentNb gene associatedNb pathway associated
1.4.1.21-RXNEc-1.4.1.21MenecoGapfilling solution with meneco draft spontaneousAdded for gapfilling00
2-OXOGLUTARATE-SYNTHASE-RXNEc-1.2.7.3MenecoGapfilling solution with meneco draft spontaneousAdded for gapfilling05
2.3.1.157-RXNEc-2.3.1.157MenecoGapfilling solution with meneco draft spontaneousAdded for gapfilling02
2.5.1.64-RXNEc-2.2.1.9MenecoGapfilling solution with meneco draft spontaneousAdded for gapfilling01
2.6.1.18-RXNEc-2.6.1.18MenecoGapfilling solution with meneco draft spontaneousAdded for gapfilling02
2.6.1.28-RXNEc-2.6.1.28MenecoGapfilling solution with meneco draft spontaneousAdded for gapfilling02
2.6.1.58-RXNEc-2.6.1.58MenecoGapfilling solution with meneco draft spontaneousAdded for gapfilling02
2.6.1.64-RXNEc-2.6.1.64MenecoGapfilling solution with meneco draft spontaneousAdded for gapfilling00
2.6.1.70-RXNEc-2.6.1.70MenecoGapfilling solution with meneco draft spontaneousAdded for gapfilling00
2.7.8.25-RXNEc-2.4.2.52MenecoGapfilling solution with meneco draft spontaneousAdded for gapfilling02
2OXOGLUTARATEDEH-RXN2-oxoglutarate dehydrogenase complexEc-1.2.1.m9MenecoGapfilling solution with meneco draft spontaneousAdded for gapfilling03
5-AMINOLEVULINIC-ACID-SYNTHASE-RXNEc-2.3.1.37MenecoGapfilling solution with meneco draft spontaneousAdded for gapfilling02
6.3.1.4-RXNEc-6.3.1.4MenecoGapfilling solution with meneco draft spontaneousAdded for gapfilling00
6.3.2.7-RXNEc-6.3.2.7MenecoGapfilling solution with meneco draft spontaneousAdded for gapfilling01
ADENOSINE-NUCLEOSIDASE-RXNEc-3.2.2.7MenecoGapfilling solution with meneco draft spontaneousAdded for gapfilling01
ADENOSYLHOMOCYSTEINE-NUCLEOSIDASE-RXNEc-3.2.2.9MenecoGapfilling solution with meneco draft spontaneousAdded for gapfilling04
ADENPHOSPHOR-RXNEc-2.4.2.1MenecoGapfilling solution with meneco draft spontaneousAdded for gapfilling05
AGMATIN-RXNEc-3.5.3.11MenecoGapfilling solution with meneco draft spontaneousAdded for gapfilling03
AICARTRANSFORM-RXNEc-2.1.2.3MenecoGapfilling solution with meneco draft spontaneousAdded for gapfilling12
ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXNEc-2.6.1.44MenecoGapfilling solution with meneco draft spontaneousAdded for gapfilling01
ALANINE-AMINOTRANSFERASE-RXNEc-2.6.1.2MenecoGapfilling solution with meneco draft spontaneousAdded for gapfilling06
AMINOLEVULINATE-AMINOTRANSFERASE-RXNEc-2.6.1.43MenecoGapfilling solution with meneco draft spontaneousAdded for gapfilling00
AMP-NUCLEOSID-RXNEc-3.2.2.4MenecoGapfilling solution with meneco draft spontaneousAdded for gapfilling01
ASNSYNA-RXNEc-6.3.1.1MenecoGapfilling solution with meneco draft spontaneousAdded for gapfilling01
ASNSYNB-RXNEc-6.3.5.4MenecoGapfilling solution with meneco draft spontaneousAdded for gapfilling01
ASPAMINOTRANS-RXNEc-2.6.1.1MenecoGapfilling solution with meneco draft spontaneousAdded for gapfilling09
ASPARTASE-RXNEc-4.3.1.1MenecoGapfilling solution with meneco draft spontaneousAdded for gapfilling01
ASPARTATE-4-DECARBOXYLASE-RXNEc-4.1.1.12MenecoGapfilling solution with meneco draft spontaneousAdded for gapfilling00
D-ALANINE-AMINOTRANSFERASE-RXNEc-2.6.1.21MenecoGapfilling solution with meneco draft spontaneousAdded for gapfilling00
DAHPSYN-RXNEc-2.5.1.54MenecoGapfilling solution with meneco draft spontaneousAdded for gapfilling01
DEOXYADENPHOSPHOR-RXNEc-2.4.2.1MenecoGapfilling solution with meneco draft spontaneousAdded for gapfilling01
DEOXYGUANPHOSPHOR-RXNEc-2.4.2.1MenecoGapfilling solution with meneco draft spontaneousAdded for gapfilling02
DMK-RXNEc-2.5.1.74MenecoGapfilling solution with meneco draft spontaneousAdded for gapfilling01
HOMOSERKIN-RXNEc-2.7.1.39MenecoGapfilling solution with meneco draft spontaneousAdded for gapfilling02
INOPHOSPHOR-RXNEc-2.4.2.1MenecoGapfilling solution with meneco draft spontaneousAdded for gapfilling03
INOSINEKIN-RXNEc-2.7.1.73MenecoGapfilling solution with meneco draft spontaneousAdded for gapfilling01
ISOCHORSYN-RXNEc-5.4.4.2MenecoGapfilling solution with meneco draft spontaneousAdded for gapfilling03
NAG1P-URIDYLTRANS-RXNEc-2.7.7.23MenecoGapfilling solution with meneco draft spontaneousAdded for gapfilling04
NAPHTHOATE-SYN-RXNEc-4.1.3.36MenecoGapfilling solution with meneco draft spontaneousAdded for gapfilling01
O-SUCCINYLBENZOATE-COA-LIG-RXNEc-6.2.1.26MenecoGapfilling solution with meneco draft spontaneousAdded for gapfilling01
O-SUCCINYLBENZOATE-COA-SYN-RXNEc-4.2.1.113MenecoGapfilling solution with meneco draft spontaneousAdded for gapfilling01
ORNDECARBOX-RXNEc-4.1.1.17MenecoGapfilling solution with meneco draft spontaneousAdded for gapfilling03
ORNITHINE-CYCLODEAMINASE-RXNEc-4.3.1.12MenecoGapfilling solution with meneco draft spontaneousAdded for gapfilling02
PROTOHEMEFERROCHELAT-RXNEc-4.99.1.1MenecoGapfilling solution with meneco draft spontaneousAdded for gapfilling03
RIBOPHOSPHAT-RXNEc-3.1.3.104MenecoGapfilling solution with meneco draft spontaneousAdded for gapfilling04
RXN-10814Ec-2.6.1.1
Ec-2.6.1.27
Ec-2.6.1.57
MenecoGapfilling solution with meneco draft spontaneousAdded for gapfilling15
RXN-11458Ec-2.5.1MenecoGapfilling solution with meneco draft spontaneousAdded for gapfilling00
RXN-11566Carboxyspermidine synthaseEc-1.5.1.43MenecoGapfilling solution with meneco draft spontaneousAdded for gapfilling11
RXN-12345Ec-4.2.1.151MenecoGapfilling solution with meneco draft spontaneousAdded for gapfilling02
RXN-12346Ec-3.2.2.30MenecoGapfilling solution with meneco draft spontaneousAdded for gapfilling01
... further results