Curation
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Common-name
Ec-number
Reconstruction category
Reconstruction source
Reconstruction comment
Nb gene associated
Nb pathway associated
1.1.1.288-RXN
Ec-1.1.1.288
Manual
Previous meneco
Reaction added with meneco (previous version)
0
1
1.2.3.14-RXN
Ec-1.2.3.14
Manual
Previous meneco
Reaction added with meneco (previous version)
0
1
1.3.3.12-RXN
Ec-1.3.3.12
Manual
Previous meneco
Reaction added with meneco (previous version)
0
0
ACECOATRANS-RXN-CPD-14717/ACET//R-2-HYDROXYSTEARATE/ACETYL-COA.47.
Manual
Previous meneco
Reaction added with meneco (previous version)
0
0
Biomass rxn
Manual
Biomass reaction
Forfba
0
0
DIAMINOPIMELATE-DEHYDROGENASE-RXN
Ec-1.4.1.16
Manual
Previous meneco
Reaction added with meneco (previous version)
0
1
Exchange BIOMASS
Manual
Biomass reaction
Exchange biomass to boundary
0
0
ExchangeSeed-ADENOSYLCOBALAMIN
Manual
Import from medium
Added to manage seeds from boundary to extracellular compartment
0
0
ExchangeSeed-AMMONIA
Manual
Import from medium
Added to manage seeds from boundary to extracellular compartment
0
0
ExchangeSeed-BIOTIN
Manual
Import from medium
Added to manage seeds from boundary to extracellular compartment
0
0
ExchangeSeed-CA+2
Manual
Import from medium
Added to manage seeds from boundary to extracellular compartment
0
0
ExchangeSeed-CARBON-DIOXIDE
Manual
Import from medium
Added to manage seeds from boundary to extracellular compartment
0
0
ExchangeSeed-CL-
Manual
Import from medium
Added to manage seeds from boundary to extracellular compartment
0
0
ExchangeSeed-CO+2
Manual
Import from medium
Added to manage seeds from boundary to extracellular compartment
0
0
ExchangeSeed-COB-I-ALAMIN
Manual
Import from medium
Added to manage seeds from boundary to extracellular compartment
0
0
ExchangeSeed-CPD-3
Manual
Import from medium
Added to manage seeds from boundary to extracellular compartment
0
0
ExchangeSeed-CPD-315
Manual
Import from medium
Added to manage seeds from boundary to extracellular compartment
0
0
ExchangeSeed-CU+
Manual
Import from medium
Added to manage seeds from boundary to extracellular compartment
0
0
ExchangeSeed-CU+2
Manual
Import from medium
Added to manage seeds from boundary to extracellular compartment
0
0
ExchangeSeed-EDTA
Manual
Import from medium
Added to manage seeds from boundary to extracellular compartment
0
0
ExchangeSeed-FE+2
Manual
Import from medium
Added to manage seeds from boundary to extracellular compartment
0
0
ExchangeSeed-FE+3
Manual
Import from medium
Added to manage seeds from boundary to extracellular compartment
0
0
ExchangeSeed-K+
Manual
Import from medium
Added to manage seeds from boundary to extracellular compartment
0
0
ExchangeSeed-Light
Manual
Import from medium
Added to manage seeds from boundary to extracellular compartment
0
0
ExchangeSeed-MG+2
Manual
Import from medium
Added to manage seeds from boundary to extracellular compartment
0
0
ExchangeSeed-MN+2
Manual
Import from medium
Added to manage seeds from boundary to extracellular compartment
0
0
ExchangeSeed-NA+
Manual
Import from medium
Added to manage seeds from boundary to extracellular compartment
0
0
ExchangeSeed-NITRATE
Manual
Import from medium
Added to manage seeds from boundary to extracellular compartment
0
0
ExchangeSeed-OXYGEN-MOLECULE
Manual
Import from medium
Added to manage seeds from boundary to extracellular compartment
0
0
ExchangeSeed-PROTON
Manual
Import from medium
Added to manage seeds from boundary to extracellular compartment
0
0
ExchangeSeed-SULFATE
Manual
Import from medium
Added to manage seeds from boundary to extracellular compartment
0
0
ExchangeSeed-THIAMINE
Manual
Import from medium
Added to manage seeds from boundary to extracellular compartment
0
0
ExchangeSeed-WATER
Manual
Import from medium
Added to manage seeds from boundary to extracellular compartment
0
0
ExchangeSeed-ZN+2
Manual
Import from medium
Added to manage seeds from boundary to extracellular compartment
0
0
MANNKIN-RXN-CPD-12601/ATP//MANNOSE-6P/ADP/PROTON.37.
Manual
Previous meneco
Reaction added with meneco (previous version)
0
0
MANNKIN-RXN-D-mannopyranose/ATP//MANNOSE-6P/ADP/PROTON.43.
Manual
Previous meneco
Reaction added with meneco (previous version)
0
0
RXN-11026-PALMITYL-COA/OXYGEN-MOLECULE//CPD0-2117/HYDROGEN-PEROXIDE.58.
Manual
Previous meneco
Reaction added with meneco (previous version)
0
0
RXN-11153
L-galactono-1,4-lactone dehydrogenase
Manual
Previous meneco
Reaction added with meneco (previous version)
0
1
RXN-11876
Ec-5.5.1.9
Manual
Reactions add sjap
Curation sterols (girard et al.)
1
1
RXN-11878
Ec-1.3.1.70
Manual
Reactions add sjap
Curation sterols (girard et al.)
1
1
RXN-11881
4α,14α-dimethyl-5α-cholesta-8,24-dien-3β-ol demethylase
4α,14α-dimethyl-5α-cholesta-8,24-dien-3β-ol 14-demethylase
Ec-1.14.13.70
Manual
Orthology
Annotation
Saccharina japonica genome
Output pantograph ectocarpus siliculosus
Reactions add sjap
N.a
Curation sterols (girard et al.)
1
0
RXN-11887
Ec-1.14.19.20
Manual
Reactions add sjap
Curation sterols (girard et al.)
1
2
RXN-13431
Ec-2.3.1
Manual
Previous meneco
Reaction added with meneco (previous version)
0
1
RXN-13709
4-methylsterol monooxygenase
Ec-1.14.18.9
Manual
Gap-filling
Gapfilling solution with meneco draft medium
Reactions add sjap
Added for gapfilling
Curation sterols (girard et al.)
0
0
RXN-19200
Ec-1.23.5
Manual
Sjap
Transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
0
1
RXN-19202
Ec-1.14.13
Manual
Sjap
Transformation of diadinoxanthin into diatoxanthin (second cycle of xanthophylls)
1
1
RXN-21829
Ec-1.14.18.10
Manual
Reactions add sjap
Curation sterols (girard et al.)
0
0
RXN-21830
Ec-1.1.1.418
Manual
Reactions add sjap
Curation sterols (girard et al.)
0
1
RXN-21831
Ec-1.1.1.270
Manual
Reactions add sjap
Curation sterols (girard et al.)
0
1
RXN-21833
Manual
Reaction creator sjap
Curation sterols (girard et al.)
0
1
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