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limit:

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offset:

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link:

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headers:

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mainlabel:

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To embed this query inline into a wiki page use the code below.

{{#ask: [[Category:Reaction]] [[Reconstruction category::Manual]]
 |?Common-name
 |?Ec-number
 |?Reconstruction tool
 |?Reconstruction source
 |?Reconstruction comment
 |?Nb gene associated
 |?Nb pathway associated
 |format=table
 |limit=50
 |offset=50
 |sort=
 |order=asc
 |mainlabel=
}}

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The query [[Category:Reaction]] [[Reconstruction category::Manual]] was answered by the "SMWSQLStore" in 0.0459 seconds.

SQLStore debug output

ASK Query

[[Category:Reaction]] [[Reconstruction category::Manual]]

SQL Query

SELECT DISTINCT
t0.smw_id AS id,
  t0.smw_title AS t,
  t0.smw_namespace AS ns,
  t0.smw_iw AS iw,
  t0.smw_subobject AS so,
  t0.smw_sortkey AS sortkey, t0.smw_sort
FROM
`sjapgem_smw_object_ids` AS t0
INNER JOIN
(`sjapgem_smw_fpt_inst` AS t2
INNER JOIN
`sjapgem_smw_di_wikipage` AS t4 ON t2.s_id=t4.s_id) ON t0.smw_id=t2.s_id
WHERE
(t2.o_id='643'
   AND (t4.p_id='27642' AND t4.o_id='627')
  )
  AND t0.smw_iw!=':smw'
  AND t0.smw_iw!=':smw-delete'
  AND t0.smw_iw!=':smw-redi'
ORDER BY
t0.smw_sort ASC
LIMIT
55
OFFSET
50

SQL Explain

ID	select_type	table	type	possible_keys	key	key_len	ref	rows	Extra
1	SIMPLE	t4	ref	s_id,o_id,p_id,s_id_2,s_id_3,o_id_2,o_id_3	o_id	5	const	109	Using where; Using temporary; Using filesort
1	SIMPLE	t2	ref	s_id,o_id,s_id_2,o_id_2	s_id_2	9	wikidb.t4.s_id,const	1	Using index
1	SIMPLE	t0	eq_ref	PRIMARY,smw_id,smw_iw,smw_iw_2	PRIMARY	4	wikidb.t4.s_id	1	Using where

Auxilliary Tables

No auxilliary tables used.

Query Metrics

Query-Size:3
Query-Depth:1

Errors and Warnings

None

	Common-name	Ec-number	Reconstruction tool	Reconstruction source	Reconstruction comment	Nb gene associated	Nb pathway associated
RXN-21834			Curation	Reaction creator sjap	Curation sterols (girard et al.)	0	1
RXN-21835			Curation	Reaction creator sjap	Curation sterols (girard et al.)	0	1
RXN-21836			Curation	Reaction creator sjap	Curation sterols (girard et al.)	0	1
RXN-21837			Curation	Reaction creator sjap	Curation sterols (girard et al.)	0	1
RXN-22198			Curation	Reactions creator sjap	Gallo2020	1	1
RXN-22199			Curation	Reaction creator sjap	Gallo2020	0	1
RXN-22203			Curation	Reaction creator sjap	Gallo2020	0	1
RXN-22204			Curation	Reaction creator sjap	Gallo2020	0	1
RXN-22205			Curation	Reaction creator sjap	Gallo2020	0	1
RXN-22206			Curation	Reactions creator sjap	Gallo2020	1	1
RXN-4315-CPD-4207/WATER//CPD-10330/CPD-4209.35.			Curation	Previous meneco	Reaction added with meneco (previous version)	0	0
RXN-4315-CPD-4207/WATER//CPD0-1108/CPD-4209.35.			Curation	Previous meneco	Reaction added with meneco (previous version)	0	0
RXN-698		Ec-1.13.11.51	Curation	Previous meneco	Reaction added with meneco (previous version)	0	1
RXN-7973-CPD-7424/OXYGEN-MOLECULE//CPD-7279/CPD-7280.44.			Curation	Previous meneco	Reaction added with meneco (previous version)	0	0
RXN-7978			Curation	Sjap	Transformation of zeaxanthin into antheraxanthin (first cycle of xanthophylls)	1	1
RXN-7979			Curation	Sjap	Transformation of antheraxanthin into violaxanthin (first cycle of xanthophylls)	1	2
RXN-8025			Curation	Sjap	Transformation of beta carotene into zeaxanthin (with beta cryptoxanthin as an intermediate)	2	3
RXN-8026			Curation	Sjap	Transformation of beta carotene into zeaxanthin (with beta cryptoxanthin as an intermediate)	2	3
RXN-8074	Neoxanthin isomerase	Ec-5.2.1	Curation	Previous meneco	Reaction added with meneco (previous version)	0	2
RXN11876			Curation	Reaction creator sjap	Curation sterols (girard et al.)	1	1
RXN11878			Curation	Reaction creator sjap	Curation sterols (girard et al.)	1	1
RXN11881			Curation	Reaction creator sjap	Curation sterols (girard et al.)	1	1
RXN11884			Curation	Reaction creator sjap	Curation sterols (girard et al.)	0	1
RXN1F-152		Ec-1.14.15.q	Curation	Sjap	Transformation of beta carotene into zeaxanthin (direct)	2	0
RXN1F-155		Ec-5.3.99.9	Curation	Previous meneco	Reaction added with meneco (previous version)	0	2
RXN21165			Curation	Reaction creator sjap	Curation sterols (girard et al.)	1	1
RXN21166			Curation	Reaction creator sjap	Curation sterols (girard et al.)	1	1
RXN21167			Curation	Reaction creator sjap	Curation sterols (girard et al.)	1	1
RXN66-318	4α-carboxy-5α-cholesta-8,24-dien-3β-ol:nad(p)+ 3-dehydrogenase (decarboxylating)	Ec-1.1.1.170	Pathwaytools Curation	Saccharina japonica genome Reactions add sjap	N.a Curation sterols (girard et al.)	1	3
RXN66-319	3-keto sterol reductase Zymosterol 3-dehydrogenase	Ec-1.1.1.270	Pathwaytools Curation	Saccharina japonica genome Reactions add sjap	N.a Curation sterols (girard et al.)	1	3
RXN66-320		Ec-5.3.3.5	Meneco Curation	Gapfilling solution with meneco draft medium Reactions add sjap	Added for gapfilling Curation sterols (girard et al.)	0	2
Transport BIOMASS			Curation	Biomass reaction	Transport biomass to external compartment	0	0
TransportSeed-ADENOSYLCOBALAMIN			Curation	Import from medium	Added to manage seeds from extracellular to cytosol compartment	0	0
TransportSeed-AMMONIA			Curation	Import from medium	Added to manage seeds from extracellular to cytosol compartment	0	0
TransportSeed-BIOTIN			Curation	Import from medium	Added to manage seeds from extracellular to cytosol compartment	0	0
TransportSeed-CA+2			Curation	Import from medium	Added to manage seeds from extracellular to cytosol compartment	0	0
TransportSeed-CARBON-DIOXIDE			Curation	Import from medium	Added to manage seeds from extracellular to cytosol compartment	0	0
TransportSeed-CL-			Curation	Import from medium	Added to manage seeds from extracellular to cytosol compartment	0	0
TransportSeed-CO+2			Curation	Import from medium	Added to manage seeds from extracellular to cytosol compartment	0	0
TransportSeed-COB-I-ALAMIN			Curation	Import from medium	Added to manage seeds from extracellular to cytosol compartment	0	0
TransportSeed-CPD-3			Curation	Import from medium	Added to manage seeds from extracellular to cytosol compartment	0	0
TransportSeed-CPD-315			Curation	Import from medium	Added to manage seeds from extracellular to cytosol compartment	0	0
TransportSeed-CU+			Curation	Import from medium	Added to manage seeds from extracellular to cytosol compartment	0	0
TransportSeed-CU+2			Curation	Import from medium	Added to manage seeds from extracellular to cytosol compartment	0	0
TransportSeed-EDTA			Curation	Import from medium	Added to manage seeds from extracellular to cytosol compartment	0	0
TransportSeed-FE+2			Curation	Import from medium	Added to manage seeds from extracellular to cytosol compartment	0	0
TransportSeed-FE+3			Curation	Import from medium	Added to manage seeds from extracellular to cytosol compartment	0	0
TransportSeed-K+			Curation	Import from medium	Added to manage seeds from extracellular to cytosol compartment	0	0
TransportSeed-Light			Curation	Import from medium	Added to manage seeds from extracellular to cytosol compartment	0	0
TransportSeed-MG+2			Curation	Import from medium	Added to manage seeds from extracellular to cytosol compartment	0	0

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