Difference between revisions of "RXN-17731"
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(Created page with "Category:reaction == Reaction RXN-14179 == * direction: ** left-to-right * common-name: ** beta-glucosidase ** scopolin β-glucosidase * ec-number: ** [http://enzyme.e...") |
(Created page with "Category:reaction == Reaction GLURS-RXN == * direction: ** left-to-right * common-name: ** glutamate-trna ligase * ec-number: ** [http://enzyme.expasy.org/EC/6.1.1.17 ec-6...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction RXN | + | == Reaction GLURS-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
− | ** | + | ** glutamate-trna ligase |
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* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/6.1.1.17 ec-6.1.1.17] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[ATP]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[GLT-tRNAs]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-GLT-tRNAs]][c] '''+''' 1 [[PPI]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | + | * Gene: [[SJ12903]] | |
− | * Gene: [[ | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
− | + | * Gene: [[SJ07890]] | |
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− | * Gene: [[ | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
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** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
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== Pathway(s) == | == Pathway(s) == | ||
+ | * [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate): | ||
+ | ** '''6''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[TRNA-CHARGING-PWY]], tRNA charging: | ||
+ | ** '''21''' reactions found over '''21''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23541 23541] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R05578 R05578] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P47700 P47700] | ||
+ | ** [http://www.uniprot.org/uniprot/O52914 O52914] | ||
+ | ** [http://www.uniprot.org/uniprot/P43818 P43818] | ||
+ | ** [http://www.uniprot.org/uniprot/O26157 O26157] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9ZLJ1 Q9ZLJ1] | ||
+ | ** [http://www.uniprot.org/uniprot/O25360 O25360] | ||
+ | ** [http://www.uniprot.org/uniprot/O51345 O51345] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9Z7Z3 Q9Z7Z3] | ||
+ | ** [http://www.uniprot.org/uniprot/P96551 P96551] | ||
+ | ** [http://www.uniprot.org/uniprot/O67271 O67271] | ||
+ | ** [http://www.uniprot.org/uniprot/O83679 O83679] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9ZLZ7 Q9ZLZ7] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PP78 Q9PP78] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9CDZ7 Q9CDZ7] | ||
+ | ** [http://www.uniprot.org/uniprot/O84451 O84451] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9X2I8 Q9X2I8] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JWT4 Q9JWT4] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9ZDK3 Q9ZDK3] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9X172 Q9X172] | ||
+ | ** [http://www.uniprot.org/uniprot/Q58772 Q58772] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9ZCT8 Q9ZCT8] | ||
+ | ** [http://www.uniprot.org/uniprot/P59690 P59690] | ||
+ | ** [http://www.uniprot.org/uniprot/Q43768 Q43768] | ||
+ | ** [http://www.uniprot.org/uniprot/Q43794 Q43794] | ||
+ | ** [http://www.uniprot.org/uniprot/P46655 P46655] | ||
+ | ** [http://www.uniprot.org/uniprot/P48525 P48525] | ||
+ | ** [http://www.uniprot.org/uniprot/P75114 P75114] | ||
+ | ** [http://www.uniprot.org/uniprot/Q49061 Q49061] | ||
+ | ** [http://www.uniprot.org/uniprot/P22249 P22249] | ||
+ | ** [http://www.uniprot.org/uniprot/P22250 P22250] | ||
+ | ** [http://www.uniprot.org/uniprot/P04805 P04805] | ||
+ | ** [http://www.uniprot.org/uniprot/P07814 P07814] | ||
+ | ** [http://www.uniprot.org/uniprot/P15189 P15189] | ||
+ | ** [http://www.uniprot.org/uniprot/O65253 O65253] | ||
+ | ** [http://www.uniprot.org/uniprot/O68055 O68055] | ||
+ | ** [http://www.uniprot.org/uniprot/O68142 O68142] | ||
+ | ** [http://www.uniprot.org/uniprot/O86528 O86528] | ||
+ | ** [http://www.uniprot.org/uniprot/O13775 O13775] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9ZFA3 Q9ZFA3] | ||
+ | ** [http://www.uniprot.org/uniprot/O82462 O82462] | ||
+ | </div> | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: common-name= | + | {{#set: common-name=glutamate-trna ligase}} |
− | {{#set: ec-number=ec- | + | {{#set: ec-number=ec-6.1.1.17}} |
− | {{#set: nb gene associated= | + | {{#set: nb gene associated=2}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=2}} |
{{#set: reconstruction category=annotation|orthology}} | {{#set: reconstruction category=annotation|orthology}} | ||
{{#set: reconstruction tool=pathwaytools|pantograph}} | {{#set: reconstruction tool=pathwaytools|pantograph}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 18:59, 14 January 2021
Contents
Reaction GLURS-RXN
- direction:
- left-to-right
- common-name:
- glutamate-trna ligase
- ec-number:
Reaction formula
Gene(s) associated with this reaction
- Gene: SJ12903
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ07890
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-5188, tetrapyrrole biosynthesis I (from glutamate):
- 6 reactions found over 6 reactions in the full pathway
- TRNA-CHARGING-PWY, tRNA charging:
- 21 reactions found over 21 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT: