Difference between revisions of "ACOA40OR"
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(Created page with "Category:reaction == Reaction RXN-10662 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/3.1.2 ec-3.1.2] == Reaction formula == * 1 CPD-1026...") |
(Created page with "Category:reaction == Reaction ARGININE--TRNA-LIGASE-RXN == * direction: ** left-to-right * common-name: ** arginine-trna ligase * ec-number: ** [http://enzyme.expasy.org/E...") |
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Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction RXN | + | == Reaction ARGININE--TRNA-LIGASE-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
+ | * common-name: | ||
+ | ** arginine-trna ligase | ||
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/6.1.1.19 ec-6.1.1.19] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[ARG]][c] '''+''' 1 [[ARG-tRNAs]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-ARG-tRNAs]][c] '''+''' 1 [[PPI]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
+ | * Gene: [[SJ11647]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ05085]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ13753]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
+ | * [[TRNA-CHARGING-PWY]], tRNA charging: | ||
+ | ** '''21''' reactions found over '''21''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
− | * category: [[ | + | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20302 20302] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R03646 R03646] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P40329 P40329] | ||
+ | ** [http://www.uniprot.org/uniprot/P35868 P35868] | ||
+ | ** [http://www.uniprot.org/uniprot/P43832 P43832] | ||
+ | ** [http://www.uniprot.org/uniprot/O51540 O51540] | ||
+ | ** [http://www.uniprot.org/uniprot/O67068 O67068] | ||
+ | ** [http://www.uniprot.org/uniprot/O59147 O59147] | ||
+ | ** [http://www.uniprot.org/uniprot/O83803 O83803] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9ZE81 Q9ZE81] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PNC0 Q9PNC0] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9X0H8 Q9X0H8] | ||
+ | ** [http://www.uniprot.org/uniprot/P46906 P46906] | ||
+ | ** [http://www.uniprot.org/uniprot/Q57689 Q57689] | ||
+ | ** [http://www.uniprot.org/uniprot/O27496 O27496] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JTM7 Q9JTM7] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9CE12 Q9CE12] | ||
+ | ** [http://www.uniprot.org/uniprot/P56128 P56128] | ||
+ | ** [http://www.uniprot.org/uniprot/P47618 P47618] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9ZMB9 Q9ZMB9] | ||
+ | ** [http://www.uniprot.org/uniprot/Q08888 Q08888] | ||
+ | ** [http://www.uniprot.org/uniprot/P54136 P54136] | ||
+ | ** [http://www.uniprot.org/uniprot/P38714 P38714] | ||
+ | ** [http://www.uniprot.org/uniprot/Q05506 Q05506] | ||
+ | ** [http://www.uniprot.org/uniprot/P75222 P75222] | ||
+ | ** [http://www.uniprot.org/uniprot/P11875 P11875] | ||
+ | ** [http://www.uniprot.org/uniprot/O23247 O23247] | ||
+ | ** [http://www.uniprot.org/uniprot/O74781 O74781] | ||
+ | </div> | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: ec-number=ec- | + | {{#set: common-name=arginine-trna ligase}} |
− | {{#set: nb gene associated= | + | {{#set: ec-number=ec-6.1.1.19}} |
− | {{#set: nb pathway associated= | + | {{#set: nb gene associated=3}} |
− | {{#set: reconstruction category= | + | {{#set: nb pathway associated=1}} |
− | {{#set: reconstruction tool= | + | {{#set: reconstruction category=annotation|orthology}} |
− | {{#set: reconstruction comment= | + | {{#set: reconstruction tool=pathwaytools|pantograph}} |
− | {{#set: reconstruction source= | + | {{#set: reconstruction comment=n.a}} |
+ | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 19:00, 14 January 2021
Contents
Reaction ARGININE--TRNA-LIGASE-RXN
- direction:
- left-to-right
- common-name:
- arginine-trna ligase
- ec-number:
Reaction formula
Gene(s) associated with this reaction
- Gene: SJ11647
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ05085
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ13753
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
Pathway(s)
- TRNA-CHARGING-PWY, tRNA charging:
- 21 reactions found over 21 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links