Difference between revisions of "ExchangeSeed-MG+2"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction PHOSPHATIDYLINOSITOL-3-PHOSPHATASE-RXN == * direction: ** left-to-right * common-name: ** phosphatidylinositol-3-phosphate 3-phosphatase * ec...")
(Created page with "Category:reaction == Reaction RXN-14801 == * direction: ** left-to-right * common-name: ** trans--2-enoyl-coa hydratase 2 * ec-number: ** [http://enzyme.expasy.org/EC/4.2....")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction PHOSPHATIDYLINOSITOL-3-PHOSPHATASE-RXN ==
+
== Reaction RXN-14801 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** phosphatidylinositol-3-phosphate 3-phosphatase
+
** trans--2-enoyl-coa hydratase 2
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/3.1.3.64 ec-3.1.3.64]
+
** [http://enzyme.expasy.org/EC/4.2.1.119 ec-4.2.1.119]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD-177]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[L-1-phosphatidyl-inositols]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[CPD-15689]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-15690]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ16630]]
+
* Gene: [[SJ04769]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[SJ21565]]
+
* Gene: [[SJ03584]]
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ13292]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ18392]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-6368]], 3-phosphoinositide degradation:
+
* [[PWY-7340]], 9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast):
** '''6''' reactions found over '''9''' reactions in the full pathway
+
** '''5''' reactions found over '''10''' reactions in the full pathway
* [[PWY-6580]], phosphatidylinositol biosynthesis I (bacteria):
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12317 12317]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R03363 R03363]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=phosphatidylinositol-3-phosphate 3-phosphatase}}
+
{{#set: common-name=trans--2-enoyl-coa hydratase 2}}
{{#set: ec-number=ec-3.1.3.64}}
+
{{#set: ec-number=ec-4.2.1.119}}
{{#set: nb gene associated=4}}
+
{{#set: nb gene associated=2}}
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 19:02, 14 January 2021

Reaction RXN-14801

  • direction:
    • left-to-right
  • common-name:
    • trans--2-enoyl-coa hydratase 2
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7340, 9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast):
    • 5 reactions found over 10 reactions in the full pathway

Reconstruction information

External links