Difference between revisions of "SJ02568"

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(Created page with "Category:gene == Gene SJ02568 == * transcription-direction: ** positive * right-end-position: ** 158079 * left-end-position: ** 144121 * centisome-position: ** 26.825535...")
(Created page with "Category:gene == Gene SJ05638 == * transcription-direction: ** negative * right-end-position: ** 66771 * left-end-position: ** 45430 * centisome-position: ** 50.524933...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ02568 ==
+
== Gene SJ05638 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 158079
+
** 66771
 
* left-end-position:
 
* left-end-position:
** 144121
+
** 45430
 
* centisome-position:
 
* centisome-position:
** 26.825535    
+
** 50.524933    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PROTEIN-KINASE-RXN]]
* [[3.6.4.5-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[ATPASE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN-12195]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN-12196]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN0-5462]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
</div>
+
{{#set: transcription-direction=negative}}
== Pathway(s) associated ==
+
{{#set: right-end-position=66771}}
* [[PWY-7210]]
+
{{#set: left-end-position=45430}}
** '''8''' reactions found over '''8''' reactions in the full pathway
+
{{#set: centisome-position=50.524933   }}
* [[PWY-7198]]
 
** '''6''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY-7184]]
 
** '''9''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-6545]]
 
** '''8''' reactions found over '''9''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=158079}}
 
{{#set: left-end-position=144121}}
 
{{#set: centisome-position=26.825535   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=4}}
 

Revision as of 11:07, 15 January 2021

Gene SJ05638

  • transcription-direction:
    • negative
  • right-end-position:
    • 66771
  • left-end-position:
    • 45430
  • centisome-position:
    • 50.524933

Organism(s) associated with this gene

Reaction(s) associated