Difference between revisions of "RXN-7580"
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(Created page with "Category:reaction == Reaction RXN-11637 == * direction: ** left-to-right * common-name: ** 16s rrna 2'-o-ribose c1402 methyltransferase * ec-number: ** [http://enzyme.expa...") |
(Created page with "Category:reaction == Reaction 3.4.11.18-RXN == * direction: ** left-to-right * common-name: ** methionine aminopeptidase * ec-number: ** [http://enzyme.expasy.org/EC/3.4.1...") |
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Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction RXN | + | == Reaction 3.4.11.18-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
− | ** | + | ** methionine aminopeptidase |
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/3.4.11.18 ec-3.4.11.18] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[Protein-With-N-Terminal-Met]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[MET]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Peptides-holder]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
+ | * Gene: [[SJ16939]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ16932]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ16573]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ02903]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ18138]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ01604]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | </div> | ||
== Pathway(s) == | == Pathway(s) == | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
− | * | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
− | ** [http://www. | + | * UNIPROT: |
+ | ** [http://www.uniprot.org/uniprot/P38062 P38062] | ||
+ | ** [http://www.uniprot.org/uniprot/P47418 P47418] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PM25 Q9PM25] | ||
+ | ** [http://www.uniprot.org/uniprot/P28617 P28617] | ||
+ | ** [http://www.uniprot.org/uniprot/P44421 P44421] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9UYT4 Q9UYT4] | ||
+ | ** [http://www.uniprot.org/uniprot/P0AE18 P0AE18] | ||
+ | ** [http://www.uniprot.org/uniprot/P50579 P50579] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JWK1 Q9JWK1] | ||
+ | ** [http://www.uniprot.org/uniprot/Q58725 Q58725] | ||
+ | ** [http://www.uniprot.org/uniprot/P56218 P56218] | ||
+ | ** [http://www.uniprot.org/uniprot/P19994 P19994] | ||
+ | ** [http://www.uniprot.org/uniprot/P22624 P22624] | ||
+ | ** [http://www.uniprot.org/uniprot/P0A1X6 P0A1X6] | ||
+ | ** [http://www.uniprot.org/uniprot/P41392 P41392] | ||
+ | ** [http://www.uniprot.org/uniprot/Q59509 Q59509] | ||
+ | ** [http://www.uniprot.org/uniprot/Q01662 Q01662] | ||
+ | ** [http://www.uniprot.org/uniprot/P95963 P95963] | ||
+ | ** [http://www.uniprot.org/uniprot/P53579 P53579] | ||
+ | ** [http://www.uniprot.org/uniprot/P53581 P53581] | ||
+ | ** [http://www.uniprot.org/uniprot/P53580 P53580] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9FV49 Q9FV49] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9Z9J4 Q9Z9J4] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9RKR2 Q9RKR2] | ||
+ | </div> | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: common-name= | + | {{#set: common-name=methionine aminopeptidase}} |
− | {{#set: ec-number=ec- | + | {{#set: ec-number=ec-3.4.11.18}} |
− | {{#set: nb gene associated= | + | {{#set: nb gene associated=6}} |
{{#set: nb pathway associated=0}} | {{#set: nb pathway associated=0}} | ||
− | {{#set: reconstruction category=annotation}} | + | {{#set: reconstruction category=annotation|orthology}} |
− | {{#set: reconstruction tool=pathwaytools}} | + | {{#set: reconstruction tool=pathwaytools|pantograph}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=saccharina_japonica_genome}} | + | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 11:23, 15 January 2021
Contents
Reaction 3.4.11.18-RXN
- direction:
- left-to-right
- common-name:
- methionine aminopeptidase
- ec-number:
Reaction formula
- 1 Protein-With-N-Terminal-Met[c] + 1 WATER[c] => 1 MET[c] + 1 PROTON[c] + 1 Peptides-holder[c]
Gene(s) associated with this reaction
- Gene: SJ16939
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ16932
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ16573
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ02903
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ18138
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ01604
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links