Difference between revisions of "SJ14526"
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(Created page with "Category:gene == Gene SJ12601 == * transcription-direction: ** negative * right-end-position: ** 149588 * left-end-position: ** 119995 * centisome-position: ** 33.636448...") |
(Created page with "Category:gene == Gene SJ21817 == * transcription-direction: ** positive * right-end-position: ** 58022 * left-end-position: ** 53154 * centisome-position: ** 28.611723...") |
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Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ21817 == |
* transcription-direction: | * transcription-direction: | ||
− | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 58022 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 53154 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 28.611723 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
+ | * [[KETOACYLCOATHIOL-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | ** Category: [[ | + | * [[RXN-10699]] |
− | *** source: [[ | + | ** Category: [[annotation]] |
− | *** source: [[ | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
+ | * [[RXN-10700]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-10701]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-11246]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-12565]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-12710]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-13617]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-14268]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-14274]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-14277]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-14394]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-14774]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-14788]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-14793]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-14799]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-14803]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-16137]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-17116]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-17778]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-17782]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-17787]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-17791]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-17795]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-17799]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | </div> | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[PWY- | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
− | ** ''' | + | * [[PWY-7288]] |
− | * [[ | + | ** '''4''' reactions found over '''5''' reactions in the full pathway |
− | ** '''2''' reactions found over ''' | + | * [[PWY-5136]] |
− | * [[PWY- | + | ** '''5''' reactions found over '''5''' reactions in the full pathway |
− | ** ''' | + | * [[FAO-PWY]] |
− | {{#set: transcription-direction= | + | ** '''6''' reactions found over '''7''' reactions in the full pathway |
− | {{#set: right-end-position= | + | * [[PWY66-391]] |
− | {{#set: left-end-position= | + | ** '''6''' reactions found over '''7''' reactions in the full pathway |
− | {{#set: centisome-position= | + | * [[PWY-735]] |
+ | ** '''16''' reactions found over '''19''' reactions in the full pathway | ||
+ | * [[PWY-6435]] | ||
+ | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-6863]] | ||
+ | ** '''9''' reactions found over '''11''' reactions in the full pathway | ||
+ | * [[PWY-6945]] | ||
+ | ** '''5''' reactions found over '''17''' reactions in the full pathway | ||
+ | * [[PWY-6946]] | ||
+ | ** '''6''' reactions found over '''22''' reactions in the full pathway | ||
+ | * [[PWY-6948]] | ||
+ | ** '''2''' reactions found over '''18''' reactions in the full pathway | ||
+ | * [[PWY-7094]] | ||
+ | ** '''5''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-7654]] | ||
+ | ** '''5''' reactions found over '''11''' reactions in the full pathway | ||
+ | * [[PWY-7337]] | ||
+ | ** '''6''' reactions found over '''12''' reactions in the full pathway | ||
+ | * [[PWY-7338]] | ||
+ | ** '''6''' reactions found over '''12''' reactions in the full pathway | ||
+ | * [[PWY-7339]] | ||
+ | ** '''3''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-7340]] | ||
+ | ** '''5''' reactions found over '''10''' reactions in the full pathway | ||
+ | * [[PWY-7606]] | ||
+ | ** '''8''' reactions found over '''14''' reactions in the full pathway | ||
+ | * [[PWY-7726]] | ||
+ | ** '''8''' reactions found over '''13''' reactions in the full pathway | ||
+ | </div> | ||
+ | {{#set: transcription-direction=positive}} | ||
+ | {{#set: right-end-position=58022}} | ||
+ | {{#set: left-end-position=53154}} | ||
+ | {{#set: centisome-position=28.611723 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=25}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=18}} |
Revision as of 08:16, 15 March 2021
Contents
Gene SJ21817
- transcription-direction:
- positive
- right-end-position:
- 58022
- left-end-position:
- 53154
- centisome-position:
- 28.611723
Organism(s) associated with this gene
Reaction(s) associated
- KETOACYLCOATHIOL-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-10699
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-10700
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-10701
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-11246
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-12565
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-12710
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-13617
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-14268
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-14274
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-14277
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-14394
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-14774
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-14788
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-14793
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-14799
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-14803
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-16137
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-17116
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-17778
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-17782
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-17787
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-17791
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-17795
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-17799
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-7288
- 4 reactions found over 5 reactions in the full pathway
- PWY-5136
- 5 reactions found over 5 reactions in the full pathway
- FAO-PWY
- 6 reactions found over 7 reactions in the full pathway
- PWY66-391
- 6 reactions found over 7 reactions in the full pathway
- PWY-735
- 16 reactions found over 19 reactions in the full pathway
- PWY-6435
- 4 reactions found over 5 reactions in the full pathway
- PWY-6863
- 9 reactions found over 11 reactions in the full pathway
- PWY-6945
- 5 reactions found over 17 reactions in the full pathway
- PWY-6946
- 6 reactions found over 22 reactions in the full pathway
- PWY-6948
- 2 reactions found over 18 reactions in the full pathway
- PWY-7094
- 5 reactions found over 6 reactions in the full pathway
- PWY-7654
- 5 reactions found over 11 reactions in the full pathway
- PWY-7337
- 6 reactions found over 12 reactions in the full pathway
- PWY-7338
- 6 reactions found over 12 reactions in the full pathway
- PWY-7339
- 3 reactions found over 6 reactions in the full pathway
- PWY-7340
- 5 reactions found over 10 reactions in the full pathway
- PWY-7606
- 8 reactions found over 14 reactions in the full pathway
- PWY-7726
- 8 reactions found over 13 reactions in the full pathway