Difference between revisions of "SJ07296"
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(Created page with "Category:gene == Gene SJ05072 == * transcription-direction: ** negative * right-end-position: ** 401739 * left-end-position: ** 384915 * centisome-position: ** 76.57546...") |
(Created page with "Category:gene == Gene SJ05072 == * transcription-direction: ** negative * right-end-position: ** 401739 * left-end-position: ** 384915 * centisome-position: ** 76.57546...") |
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** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | ** Category: [[manual]] | ||
+ | *** source: [[reactions_add_sjap]]; tool: [[unknown-tool]]; comment: curation sterols (girard et al.) | ||
* [[RXN-13707]] | * [[RXN-13707]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
− | |||
− | |||
− | |||
* [[RXN1F-160]] | * [[RXN1F-160]] | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
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** '''3''' reactions found over '''25''' reactions in the full pathway | ** '''3''' reactions found over '''25''' reactions in the full pathway | ||
* [[PWY-8191]] | * [[PWY-8191]] | ||
− | ** ''' | + | ** '''11''' reactions found over '''19''' reactions in the full pathway |
* [[PWY-6074]] | * [[PWY-6074]] | ||
** '''6''' reactions found over '''14''' reactions in the full pathway | ** '''6''' reactions found over '''14''' reactions in the full pathway | ||
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{{#set: centisome-position=76.57546 }} | {{#set: centisome-position=76.57546 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=24}} |
{{#set: nb pathway associated=12}} | {{#set: nb pathway associated=12}} |
Revision as of 08:18, 15 March 2021
Contents
Gene SJ05072
- transcription-direction:
- negative
- right-end-position:
- 401739
- left-end-position:
- 384915
- centisome-position:
- 76.57546
Organism(s) associated with this gene
Reaction(s) associated
- 1.14.13.70-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- 1.14.13.79-RXN
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- RXN-1121
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- RXN-11881
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: manual
- source: reactions_add_sjap; tool: unknown-tool; comment: curation sterols (girard et al.)
- Category: annotation
- RXN-13707
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN-13961
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN-3661
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- RXN-4225
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- RXN-4231
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- RXN-715
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- RXN-773
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- RXN1F-160
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- RXN1F-161
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- RXN21165
- Category: manual
- source: reaction_creator_sjap; tool: unknown-tool; comment: curation sterols (girard et al.)
- Category: manual
- RXN21166
- Category: manual
- source: reaction_creator_sjap; tool: unknown-tool; comment: curation sterols (girard et al.)
- Category: manual
- RXN21167
- Category: manual
- source: reaction_creator_sjap; tool: unknown-tool; comment: curation sterols (girard et al.)
- Category: manual
- RXN3O-130
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN66-11
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN66-12
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN66-13
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN66-303
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN66-304
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN66-305
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- UNSPECIFIC-MONOOXYGENASE-RXN
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
Pathway(s) associated
- PWY-2541
- 11 reactions found over 35 reactions in the full pathway
- PWY-5047
- 6 reactions found over 15 reactions in the full pathway
- PWY-5034
- 6 reactions found over 6 reactions in the full pathway
- PWY-2181
- 3 reactions found over 4 reactions in the full pathway
- PWY-5640
- 1 reactions found over 1 reactions in the full pathway
- PWY-2582
- 4 reactions found over 21 reactions in the full pathway
- PWY-699
- 3 reactions found over 25 reactions in the full pathway
- PWY-8191
- 11 reactions found over 19 reactions in the full pathway
- PWY-6074
- 6 reactions found over 14 reactions in the full pathway
- PWY66-3
- 12 reactions found over 18 reactions in the full pathway
- PWY66-4
- 14 reactions found over 4 reactions in the full pathway
- PWY66-341
- 14 reactions found over 18 reactions in the full pathway