Difference between revisions of "SJ20537"
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(Created page with "Category:gene == Gene SJ09609 == * transcription-direction: ** negative * right-end-position: ** 118815 * left-end-position: ** 109612 * centisome-position: ** 26.756691...") |
(Created page with "Category:gene == Gene SJ07891 == * transcription-direction: ** negative * right-end-position: ** 34344 * left-end-position: ** 29673 * centisome-position: ** 48.846855...") |
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Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ07891 == |
* transcription-direction: | * transcription-direction: | ||
** negative | ** negative | ||
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 34344 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 29673 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 48.846855 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | * [[S-ADENMETSYN-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[PWY- | + | * [[ETHYL-PWY]] |
− | ** ''' | + | ** '''3''' reactions found over '''3''' reactions in the full pathway |
+ | * [[METHIONINE-DEG1-PWY]] | ||
+ | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[SAM-PWY]] | ||
+ | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
+ | * [[PWY-5912]] | ||
+ | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-5041]] | ||
+ | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
{{#set: transcription-direction=negative}} | {{#set: transcription-direction=negative}} | ||
− | {{#set: right-end-position= | + | {{#set: right-end-position=34344}} |
− | {{#set: left-end-position= | + | {{#set: left-end-position=29673}} |
− | {{#set: centisome-position= | + | {{#set: centisome-position=48.846855 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=1}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=5}} |
Revision as of 08:20, 15 March 2021
Contents
Gene SJ07891
- transcription-direction:
- negative
- right-end-position:
- 34344
- left-end-position:
- 29673
- centisome-position:
- 48.846855
Organism(s) associated with this gene
Reaction(s) associated
- S-ADENMETSYN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- ETHYL-PWY
- 3 reactions found over 3 reactions in the full pathway
- METHIONINE-DEG1-PWY
- 2 reactions found over 3 reactions in the full pathway
- SAM-PWY
- 1 reactions found over 1 reactions in the full pathway
- PWY-5912
- 1 reactions found over 4 reactions in the full pathway
- PWY-5041
- 3 reactions found over 3 reactions in the full pathway