Difference between revisions of "SJ06001"
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(Created page with "Category:gene == Gene SJ19601 == * transcription-direction: ** positive * right-end-position: ** 90128 * left-end-position: ** 84657 * centisome-position: ** 37.73098...") |
(Created page with "Category:gene == Gene SJ00485 == * transcription-direction: ** positive * right-end-position: ** 118882 * left-end-position: ** 102950 * centisome-position: ** 61.840748...") |
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[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ00485 == |
* transcription-direction: | * transcription-direction: | ||
** positive | ** positive | ||
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 118882 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 102950 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 61.840748 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | + | * [[ACETYL-COA-CARBOXYLTRANSFER-RXN]] | |
− | * [[ | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
− | *** source: [[ | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
− | * [[ | + | * [[BIOTIN-CARBOXYL-RXN]] |
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** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * | + | * [[PYRUVATE-CARBOXYLASE-RXN]] |
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** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | ** | + | == Pathway(s) associated == |
− | *** | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
+ | * [[PWY-7388]] | ||
+ | ** '''7''' reactions found over '''11''' reactions in the full pathway | ||
+ | * [[PWY-6679]] | ||
+ | ** '''1''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[PWY0-1264]] | ||
+ | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-5744]] | ||
+ | ** '''4''' reactions found over '''13''' reactions in the full pathway | ||
+ | * [[PWY-5743]] | ||
+ | ** '''5''' reactions found over '''13''' reactions in the full pathway | ||
+ | * [[PWY-5789]] | ||
+ | ** '''8''' reactions found over '''18''' reactions in the full pathway | ||
+ | * [[PWY-5750]] | ||
+ | ** '''3''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[P42-PWY]] | ||
+ | ** '''5''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY66-399]] | ||
+ | ** '''11''' reactions found over '''12''' reactions in the full pathway | ||
+ | * [[PWY-6146]] | ||
+ | ** '''9''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-6142]] | ||
+ | ** '''10''' reactions found over '''13''' reactions in the full pathway | ||
</div> | </div> | ||
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{{#set: transcription-direction=positive}} | {{#set: transcription-direction=positive}} | ||
− | {{#set: right-end-position= | + | {{#set: right-end-position=118882}} |
− | {{#set: left-end-position= | + | {{#set: left-end-position=102950}} |
− | {{#set: centisome-position= | + | {{#set: centisome-position=61.840748 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=3}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=11}} |
Revision as of 08:22, 15 March 2021
Contents
Gene SJ00485
- transcription-direction:
- positive
- right-end-position:
- 118882
- left-end-position:
- 102950
- centisome-position:
- 61.840748
Organism(s) associated with this gene
Reaction(s) associated
- ACETYL-COA-CARBOXYLTRANSFER-RXN
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- BIOTIN-CARBOXYL-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- PYRUVATE-CARBOXYLASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-7388
- 7 reactions found over 11 reactions in the full pathway
- PWY-6679
- 1 reactions found over 9 reactions in the full pathway
- PWY0-1264
- 3 reactions found over 4 reactions in the full pathway
- PWY-5744
- 4 reactions found over 13 reactions in the full pathway
- PWY-5743
- 5 reactions found over 13 reactions in the full pathway
- PWY-5789
- 8 reactions found over 18 reactions in the full pathway
- PWY-5750
- 3 reactions found over 2 reactions in the full pathway
- P42-PWY
- 5 reactions found over 7 reactions in the full pathway
- PWY66-399
- 11 reactions found over 12 reactions in the full pathway
- PWY-6146
- 9 reactions found over 2 reactions in the full pathway
- PWY-6142
- 10 reactions found over 13 reactions in the full pathway