Difference between revisions of "SULFITE-REDUCT-RXN"

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(Created page with "Category:reaction == Reaction SUCCINATE--COA-LIGASE-GDP-FORMING-RXN == * direction: ** reversible * common-name: ** succinate-coa ligase * ec-number: ** [http://enzyme.exp...")
(Created page with "Category:reaction == Reaction RIBOKIN-RXN == * direction: ** left-to-right * common-name: ** ribokinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.15 ec-2.7.1.15]...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction SUCCINATE--COA-LIGASE-GDP-FORMING-RXN ==
+
== Reaction RIBOKIN-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** succinate-coa ligase
+
** ribokinase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.2.1.4 ec-6.2.1.4]
+
** [http://enzyme.expasy.org/EC/2.7.1.15 ec-2.7.1.15]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CO-A]][c] '''+''' 1 [[GTP]][c] '''+''' 1 [[SUC]][c] '''<=>''' 1 [[GDP]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[SUC-COA]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[CPD-10330]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[CPD-15318]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ03269]]
+
* Gene: [[SJ01736]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ07367]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ21782]]
+
* Gene: [[SJ08247]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY66-398]], TCA cycle III (animals):
+
* [[RIBOKIN-PWY]], ribose phosphorylation:
−
** '''10''' reactions found over '''10''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR116251
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22123 22123]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13698 13698]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00432 R00432]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01051 R01051]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q03184 Q03184]
+
** [http://www.uniprot.org/uniprot/P44331 P44331]
−
** [http://www.uniprot.org/uniprot/O08371 O08371]
+
** [http://www.uniprot.org/uniprot/P36945 P36945]
−
** [http://www.uniprot.org/uniprot/O84829 O84829]
+
** [http://www.uniprot.org/uniprot/Q57849 Q57849]
−
** [http://www.uniprot.org/uniprot/Q8LAD2 Q8LAD2]
+
** [http://www.uniprot.org/uniprot/Q9CF42 Q9CF42]
−
** [http://www.uniprot.org/uniprot/P53587 P53587]
+
** [http://www.uniprot.org/uniprot/P25332 P25332]
−
** [http://www.uniprot.org/uniprot/P53312 P53312]
+
** [http://www.uniprot.org/uniprot/P0A9J6 P0A9J6]
−
** [http://www.uniprot.org/uniprot/P36967 P36967]
+
** [http://www.uniprot.org/uniprot/O93727 O93727]
−
** [http://www.uniprot.org/uniprot/P13086 P13086]
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/Q9Y436 Q9Y436]
+
{{#set: common-name=ribokinase}}
−
** [http://www.uniprot.org/uniprot/P68209 P68209]
+
{{#set: ec-number=ec-2.7.1.15}}
−
{{#set: direction=reversible}}
+
{{#set: nb gene associated=3}}
−
{{#set: common-name=succinate-coa ligase}}
 
−
{{#set: ec-number=ec-6.2.1.4}}
 
−
{{#set: nb gene associated=2}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Revision as of 08:34, 15 March 2021

Reaction RIBOKIN-RXN

  • direction:
    • left-to-right
  • common-name:
    • ribokinase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • RIBOKIN-PWY, ribose phosphorylation:
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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