Difference between revisions of "3.5.1.26-RXN"
Jump to navigation
Jump to search
(Created page with "Category:reaction == Reaction RXN-13294 == * direction: ** left-to-right * common-name: ** 3-oxo-arachidoyl-coa synthase * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1...") |
(Created page with "Category:reaction == Reaction ALDHDEHYDROG-RXN == * direction: ** left-to-right * common-name: ** aldehyde dehydrogenase (nad) ** aldehyde dehydrogenase * ec-number: ** [h...") |
||
Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction RXN | + | == Reaction ALDHDEHYDROG-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
− | ** | + | ** aldehyde dehydrogenase (nad) |
+ | ** aldehyde dehydrogenase | ||
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/2 | + | ** [http://enzyme.expasy.org/EC/1.2.1.3 ec-1.2.1.3] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[Aldehydes]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Carboxylates]][c] '''+''' 1 [[NADH]][c] '''+''' 2 [[PROTON]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
+ | * Gene: [[SJ17249]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ06470]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
− | * Gene: [[ | + | ** Category: [[orthology]] |
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ11330]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ11331]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ22552]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ09287]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ00435]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ06359]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a |
− | * Gene: [[ | + | * Gene: [[SJ10107]] |
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ06047]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ06456]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
− | * Gene: [[ | + | ** Category: [[orthology]] |
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ05897]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a |
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | </div> | ||
== Pathway(s) == | == Pathway(s) == | ||
− | * [[PWY- | + | * [[PWY-7269]], mitochondrial NADPH production (yeast): |
− | ** ''' | + | ** '''5''' reactions found over '''5''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
+ | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
+ | * METANETX-RXN : MNXR106570 | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16186 16186] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R00538 R00538] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P08157 P08157] | ||
+ | ** [http://www.uniprot.org/uniprot/P13601 P13601] | ||
+ | ** [http://www.uniprot.org/uniprot/P30839 P30839] | ||
+ | ** [http://www.uniprot.org/uniprot/P46368 P46368] | ||
+ | ** [http://www.uniprot.org/uniprot/P33744 P33744] | ||
+ | ** [http://www.uniprot.org/uniprot/P47895 P47895] | ||
+ | ** [http://www.uniprot.org/uniprot/P12693 P12693] | ||
+ | ** [http://www.uniprot.org/uniprot/P00352 P00352] | ||
+ | ** [http://www.uniprot.org/uniprot/P05091 P05091] | ||
+ | ** [http://www.uniprot.org/uniprot/P96824 P96824] | ||
+ | ** [http://www.uniprot.org/uniprot/P63937 P63937] | ||
+ | ** [http://www.uniprot.org/uniprot/P23883 P23883] | ||
+ | ** [http://www.uniprot.org/uniprot/P43353 P43353] | ||
+ | ** [http://www.uniprot.org/uniprot/P47738 P47738] | ||
+ | ** [http://www.uniprot.org/uniprot/Q27640 Q27640] | ||
+ | ** [http://www.uniprot.org/uniprot/P51647 P51647] | ||
+ | ** [http://www.uniprot.org/uniprot/P24549 P24549] | ||
+ | ** [http://www.uniprot.org/uniprot/P12762 P12762] | ||
+ | ** [http://www.uniprot.org/uniprot/P15437 P15437] | ||
+ | ** [http://www.uniprot.org/uniprot/P11884 P11884] | ||
+ | ** [http://www.uniprot.org/uniprot/P20000 P20000] | ||
+ | ** [http://www.uniprot.org/uniprot/P27463 P27463] | ||
+ | ** [http://www.uniprot.org/uniprot/P51977 P51977] | ||
+ | ** [http://www.uniprot.org/uniprot/P33008 P33008] | ||
+ | ** [http://www.uniprot.org/uniprot/P32872 P32872] | ||
+ | ** [http://www.uniprot.org/uniprot/P49189 P49189] | ||
+ | ** [http://www.uniprot.org/uniprot/P39616 P39616] | ||
+ | ** [http://www.uniprot.org/uniprot/P42041 P42041] | ||
+ | ** [http://www.uniprot.org/uniprot/P40108 P40108] | ||
+ | ** [http://www.uniprot.org/uniprot/Q25417 Q25417] | ||
+ | ** [http://www.uniprot.org/uniprot/P45959 P45959] | ||
+ | ** [http://www.uniprot.org/uniprot/P37685 P37685] | ||
+ | ** [http://www.uniprot.org/uniprot/P40047 P40047] | ||
+ | ** [http://www.uniprot.org/uniprot/Q7M0F9 Q7M0F9] | ||
+ | ** [http://www.uniprot.org/uniprot/P54114 P54114] | ||
+ | ** [http://www.uniprot.org/uniprot/P54115 P54115] | ||
+ | ** [http://www.uniprot.org/uniprot/P46367 P46367] | ||
+ | ** [http://www.uniprot.org/uniprot/Q62148 Q62148] | ||
+ | ** [http://www.uniprot.org/uniprot/Q55811 Q55811] | ||
+ | ** [http://www.uniprot.org/uniprot/P93344 P93344] | ||
+ | ** [http://www.uniprot.org/uniprot/O68123 O68123] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9SU63 Q9SU63] | ||
+ | ** [http://www.uniprot.org/uniprot/P23240 P23240] | ||
+ | ** [http://www.uniprot.org/uniprot/O85973 O85973] | ||
+ | </div> | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: common-name= | + | {{#set: common-name=aldehyde dehydrogenase|aldehyde dehydrogenase (nad)}} |
− | {{#set: ec-number=ec-2 | + | {{#set: ec-number=ec-1.2.1.3}} |
− | {{#set: nb gene associated= | + | {{#set: nb gene associated=12}} |
{{#set: nb pathway associated=1}} | {{#set: nb pathway associated=1}} | ||
− | {{#set: reconstruction category=annotation}} | + | {{#set: reconstruction category=orthology|annotation}} |
− | {{#set: reconstruction tool=pathwaytools}} | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=saccharina_japonica_genome}} | + | {{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}} |
Revision as of 08:37, 15 March 2021
Contents
Reaction ALDHDEHYDROG-RXN
- direction:
- left-to-right
- common-name:
- aldehyde dehydrogenase (nad)
- aldehyde dehydrogenase
- ec-number:
Reaction formula
Gene(s) associated with this reaction
- Gene: SJ17249
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ06470
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ11330
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ11331
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ22552
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ09287
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ00435
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ06359
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ10107
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ06047
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ06456
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ05897
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-7269, mitochondrial NADPH production (yeast):
- 5 reactions found over 5 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
- METANETX-RXN : MNXR106570
- RHEA:
- LIGAND-RXN:
- UNIPROT:
- P08157
- P13601
- P30839
- P46368
- P33744
- P47895
- P12693
- P00352
- P05091
- P96824
- P63937
- P23883
- P43353
- P47738
- Q27640
- P51647
- P24549
- P12762
- P15437
- P11884
- P20000
- P27463
- P51977
- P33008
- P32872
- P49189
- P39616
- P42041
- P40108
- Q25417
- P45959
- P37685
- P40047
- Q7M0F9
- P54114
- P54115
- P46367
- Q62148
- Q55811
- P93344
- O68123
- Q9SU63
- P23240
- O85973