Difference between revisions of "SJ05155"

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(Created page with "Category:gene == Gene SJ20077 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * NARINGENIN-CHALCONE-SYNT...")
(Created page with "Category:gene == Gene SJ05155 == * transcription-direction: ** positive * right-end-position: ** 432205 * left-end-position: ** 412493 * centisome-position: ** 82.23725...")
 
(3 intermediate revisions by 3 users not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ20077 ==
+
== Gene SJ05155 ==
 +
* transcription-direction:
 +
** positive
 +
* right-end-position:
 +
** 432205
 +
* left-end-position:
 +
** 412493
 +
* centisome-position:
 +
** 82.23725   
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[NARINGENIN-CHALCONE-SYNTHASE-RXN]]
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* [[RXN-15559]]
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** Category: [[orthology]]
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** Category: [[annotation]]
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* [[RXN-15560]]
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* [[RXN-7645]]
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** Category: [[annotation]]
−
** Category: [[orthology]]
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6787]]
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* [[PWY-7511]]
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** '''6''' reactions found over '''10''' reactions in the full pathway
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** '''7''' reactions found over '''9''' reactions in the full pathway
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* [[PWY1F-FLAVSYN]]
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{{#set: transcription-direction=positive}}
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** '''5''' reactions found over '''5''' reactions in the full pathway
+
{{#set: right-end-position=432205}}
−
* [[PWY-5135]]
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{{#set: left-end-position=412493}}
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
{{#set: centisome-position=82.23725    }}
−
* [[PWY-7397]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6316]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-7897]]
 
−
** '''3''' reactions found over '''15''' reactions in the full pathway
 
−
* [[PWY-5059]]
 
−
** '''3''' reactions found over '''5''' reactions in the full pathway
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=1}}

Latest revision as of 11:04, 18 March 2021

Gene SJ05155

  • transcription-direction:
    • positive
  • right-end-position:
    • 432205
  • left-end-position:
    • 412493
  • centisome-position:
    • 82.23725

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7511
    • 7 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ05155&oldid=133213"