Difference between revisions of "SJ08677"
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(Created page with "Category:gene == Gene SJ13010 == * transcription-direction: ** negative * right-end-position: ** 152271 * left-end-position: ** 145621 * centisome-position: ** 41.959057...") |
(Created page with "Category:gene == Gene SJ08677 == * transcription-direction: ** negative * right-end-position: ** 10657 * left-end-position: ** 4563 * centisome-position: ** 8.991133 =...") |
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[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ08677 == |
* transcription-direction: | * transcription-direction: | ||
** negative | ** negative | ||
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 10657 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 4563 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 8.991133 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
− | * [[S. | + | * [[S.japonica_carotenoid_curated]] |
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | * [[ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN]] |
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
+ | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[N-ACETYLGLUTPREDUCT-RXN]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-15006]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[PWY- | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
+ | * [[PWY-5097]] | ||
+ | ** '''7''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY-6559]] | ||
+ | ** '''2''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[P101-PWY]] | ||
+ | ** '''2''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[DAPLYSINESYN-PWY]] | ||
+ | ** '''7''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[PWY-2941]] | ||
+ | ** '''6''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[PWY-2942]] | ||
+ | ** '''6''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY-6562]] | ||
+ | ** '''2''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-7153]] | ||
+ | ** '''4''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[HOMOSERSYN-PWY]] | ||
** '''3''' reactions found over '''3''' reactions in the full pathway | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
− | * [[PWY- | + | * [[PWY-5154]] |
− | ** ''' | + | ** '''8''' reactions found over '''9''' reactions in the full pathway |
− | * [[PWY | + | * [[GLUTORN-PWY]] |
** '''5''' reactions found over '''5''' reactions in the full pathway | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
− | * [[ | + | * [[ARGSYNBSUB-PWY]] |
− | ** ''' | + | ** '''9''' reactions found over '''9''' reactions in the full pathway |
+ | * [[PWY-7400]] | ||
+ | ** '''7''' reactions found over '''9''' reactions in the full pathway | ||
+ | </div> | ||
{{#set: transcription-direction=negative}} | {{#set: transcription-direction=negative}} | ||
− | {{#set: right-end-position= | + | {{#set: right-end-position=10657}} |
− | {{#set: left-end-position= | + | {{#set: left-end-position=4563}} |
− | {{#set: centisome-position= | + | {{#set: centisome-position=8.991133 }} |
− | {{#set: organism associated=S. | + | {{#set: organism associated=S.japonica_carotenoid_curated}} |
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=3}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=13}} |
Latest revision as of 11:04, 18 March 2021
Contents
Gene SJ08677
- transcription-direction:
- negative
- right-end-position:
- 10657
- left-end-position:
- 4563
- centisome-position:
- 8.991133
Organism(s) associated with this gene
Reaction(s) associated
- ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- N-ACETYLGLUTPREDUCT-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-15006
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-5097
- 7 reactions found over 7 reactions in the full pathway
- PWY-6559
- 2 reactions found over 4 reactions in the full pathway
- P101-PWY
- 2 reactions found over 5 reactions in the full pathway
- DAPLYSINESYN-PWY
- 7 reactions found over 9 reactions in the full pathway
- PWY-2941
- 6 reactions found over 9 reactions in the full pathway
- PWY-2942
- 6 reactions found over 7 reactions in the full pathway
- PWY-6562
- 2 reactions found over 6 reactions in the full pathway
- PWY-7153
- 4 reactions found over 8 reactions in the full pathway
- HOMOSERSYN-PWY
- 3 reactions found over 3 reactions in the full pathway
- PWY-5154
- 8 reactions found over 9 reactions in the full pathway
- GLUTORN-PWY
- 5 reactions found over 5 reactions in the full pathway
- ARGSYNBSUB-PWY
- 9 reactions found over 9 reactions in the full pathway
- PWY-7400
- 7 reactions found over 9 reactions in the full pathway