Difference between revisions of "SJ15937"
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(Created page with "Category:gene == Gene SJ16092 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * 4.2.2.10-RXN ** Catego...") |
(Created page with "Category:gene == Gene SJ15937 == * transcription-direction: ** negative * right-end-position: ** 97175 * left-end-position: ** 85900 * centisome-position: ** 29.683023...") |
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[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ15937 == |
+ | * transcription-direction: | ||
+ | ** negative | ||
+ | * right-end-position: | ||
+ | ** 97175 | ||
+ | * left-end-position: | ||
+ | ** 85900 | ||
+ | * centisome-position: | ||
+ | ** 29.683023 | ||
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
− | ** Category: [[ | + | * [[ACSERLY-RXN]] |
− | *** source: [[ | + | ** Category: [[annotation]] |
− | * [[RXN | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
+ | * [[CYSTATHIONINE-BETA-SYNTHASE-RXN]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[NITRITE-REDUCTASE-CYTOCHROME-RXN]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-12726]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-15838]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[SULFOCYS-RXN]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | </div> | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[PWY- | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
− | ** '''1''' reactions found over ''' | + | * [[CYSTSYN-PWY]] |
+ | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[HOMOCYSDEGR-PWY]] | ||
+ | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-I9]] | ||
+ | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-801]] | ||
+ | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[P303-PWY]] | ||
+ | ** '''1''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-6748]] | ||
+ | ** '''1''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-6523]] | ||
+ | ** '''1''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-7084]] | ||
+ | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-6936]] | ||
+ | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[DENITRIFICATION-PWY]] | ||
+ | ** '''1''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-7870]] | ||
+ | ** '''2''' reactions found over '''4''' reactions in the full pathway | ||
+ | </div> | ||
+ | {{#set: transcription-direction=negative}} | ||
+ | {{#set: right-end-position=97175}} | ||
+ | {{#set: left-end-position=85900}} | ||
+ | {{#set: centisome-position=29.683023 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=6}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=11}} |
Latest revision as of 11:04, 18 March 2021
Contents
Gene SJ15937
- transcription-direction:
- negative
- right-end-position:
- 97175
- left-end-position:
- 85900
- centisome-position:
- 29.683023
Organism(s) associated with this gene
Reaction(s) associated
- ACSERLY-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- CYSTATHIONINE-BETA-SYNTHASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- NITRITE-REDUCTASE-CYTOCHROME-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-12726
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-15838
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- SULFOCYS-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- CYSTSYN-PWY
- 2 reactions found over 2 reactions in the full pathway
- HOMOCYSDEGR-PWY
- 2 reactions found over 2 reactions in the full pathway
- PWY-I9
- 4 reactions found over 5 reactions in the full pathway
- PWY-801
- 3 reactions found over 4 reactions in the full pathway
- P303-PWY
- 1 reactions found over 3 reactions in the full pathway
- PWY-6748
- 1 reactions found over 5 reactions in the full pathway
- PWY-6523
- 1 reactions found over 3 reactions in the full pathway
- PWY-7084
- 1 reactions found over 4 reactions in the full pathway
- PWY-6936
- 5 reactions found over 5 reactions in the full pathway
- DENITRIFICATION-PWY
- 1 reactions found over 5 reactions in the full pathway
- PWY-7870
- 2 reactions found over 4 reactions in the full pathway