Difference between revisions of "SJ18284"
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(Created page with "Category:gene == Gene SJ20794 == * transcription-direction: ** negative * right-end-position: ** 118290 * left-end-position: ** 80158 * centisome-position: ** 39.42087...") |
(Created page with "Category:gene == Gene SJ18284 == * transcription-direction: ** positive * right-end-position: ** 139005 * left-end-position: ** 126738 * centisome-position: ** 19.549162...") |
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[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ18284 == |
* transcription-direction: | * transcription-direction: | ||
− | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 139005 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 126738 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 19.549162 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
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* [[CDPREDUCT-RXN]] | * [[CDPREDUCT-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
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− | |||
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− | |||
− | |||
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− | |||
− | |||
− | |||
− | |||
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− | |||
* [[GDPREDUCT-RXN]] | * [[GDPREDUCT-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
− | |||
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− | |||
* [[RIBONUCLEOSIDE-DIP-REDUCTI-RXN]] | * [[RIBONUCLEOSIDE-DIP-REDUCTI-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
Line 65: | Line 41: | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
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− | |||
* [[RXN0-722]] | * [[RXN0-722]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
Line 86: | Line 56: | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
− | |||
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* [[UDPREDUCT-RXN]] | * [[UDPREDUCT-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
Line 97: | Line 64: | ||
</div> | </div> | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | |||
* [[PWY-7220]] | * [[PWY-7220]] | ||
** '''4''' reactions found over '''4''' reactions in the full pathway | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
* [[PWY-7227]] | * [[PWY-7227]] | ||
− | |||
− | |||
** '''2''' reactions found over '''2''' reactions in the full pathway | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
* [[PWY0-166]] | * [[PWY0-166]] | ||
Line 114: | Line 78: | ||
* [[PWY-6545]] | * [[PWY-6545]] | ||
** '''8''' reactions found over '''9''' reactions in the full pathway | ** '''8''' reactions found over '''9''' reactions in the full pathway | ||
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− | |||
− | |||
* [[PWY-7222]] | * [[PWY-7222]] | ||
** '''4''' reactions found over '''4''' reactions in the full pathway | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
* [[PWY-7226]] | * [[PWY-7226]] | ||
** '''2''' reactions found over '''2''' reactions in the full pathway | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
− | + | {{#set: transcription-direction=positive}} | |
− | + | {{#set: right-end-position=139005}} | |
− | + | {{#set: left-end-position=126738}} | |
− | + | {{#set: centisome-position=19.549162 }} | |
− | |||
− | |||
− | |||
− | |||
− | |||
− | {{#set: transcription-direction= | ||
− | {{#set: right-end-position= | ||
− | {{#set: left-end-position= | ||
− | {{#set: centisome-position= | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=9}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=9}} |
Latest revision as of 11:07, 18 March 2021
Contents
Gene SJ18284
- transcription-direction:
- positive
- right-end-position:
- 139005
- left-end-position:
- 126738
- centisome-position:
- 19.549162
Organism(s) associated with this gene
Reaction(s) associated
- ADPREDUCT-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- CDPREDUCT-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- GDPREDUCT-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RIBONUCLEOSIDE-DIP-REDUCTI-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RIBONUCLEOSIDE-DIP-REDUCTII-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN0-722
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN0-747
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN0-748
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- UDPREDUCT-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-7220
- 4 reactions found over 4 reactions in the full pathway
- PWY-7227
- 2 reactions found over 2 reactions in the full pathway
- PWY0-166
- 14 reactions found over 13 reactions in the full pathway
- PWY-7210
- 8 reactions found over 8 reactions in the full pathway
- PWY-7198
- 6 reactions found over 7 reactions in the full pathway
- PWY-7184
- 9 reactions found over 9 reactions in the full pathway
- PWY-6545
- 8 reactions found over 9 reactions in the full pathway
- PWY-7222
- 4 reactions found over 4 reactions in the full pathway
- PWY-7226
- 2 reactions found over 2 reactions in the full pathway