Difference between revisions of "SJ12963"

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(Created page with "Category:gene == Gene SJ06138 == * transcription-direction: ** positive * right-end-position: ** 78809 * left-end-position: ** 47438 * centisome-position: ** 56.93676...")
(Created page with "Category:gene == Gene SJ12963 == * transcription-direction: ** negative * right-end-position: ** 250407 * left-end-position: ** 237577 * centisome-position: ** 68.185585...")
 
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ06138 ==
+
== Gene SJ12963 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 78809
+
** 250407
 
* left-end-position:
 
* left-end-position:
** 47438
+
** 237577
 
* centisome-position:
 
* centisome-position:
** 56.93676    
+
** 68.185585    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
+
* [[2.7.11.2-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
== Pathway(s) associated ==
+
* [[2.7.11.4-RXN]]
* [[PWY-7511]]
+
** Category: [[orthology]]
** '''7''' reactions found over '''9''' reactions in the full pathway
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
{{#set: transcription-direction=positive}}
+
* [[PROTEIN-KINASE-RXN]]
{{#set: right-end-position=78809}}
+
** Category: [[annotation]]
{{#set: left-end-position=47438}}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
{{#set: centisome-position=56.93676   }}
+
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=250407}}
 +
{{#set: left-end-position=237577}}
 +
{{#set: centisome-position=68.185585   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=3}}
{{#set: nb pathway associated=1}}
 

Latest revision as of 11:08, 18 March 2021

Gene SJ12963

  • transcription-direction:
    • negative
  • right-end-position:
    • 250407
  • left-end-position:
    • 237577
  • centisome-position:
    • 68.185585

Organism(s) associated with this gene

Reaction(s) associated