Difference between revisions of "SJ02182"
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(Created page with "Category:gene == Gene SJ03879 == * transcription-direction: ** positive * right-end-position: ** 38277 * left-end-position: ** 32554 * centisome-position: ** 6.2690773...") |
(Created page with "Category:gene == Gene SJ02182 == * transcription-direction: ** positive * right-end-position: ** 369860 * left-end-position: ** 340317 * centisome-position: ** 62.615246...") |
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[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ02182 == |
* transcription-direction: | * transcription-direction: | ||
** positive | ** positive | ||
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 369860 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 340317 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 62.615246 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | + | * [[RIBOFLAVINSYNREDUC-RXN]] | |
− | * [[ | ||
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** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
− | * [[RXN- | + | * [[RXN-10057]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[RXN- | + | * [[RXN-14171]] |
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** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
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== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[PWY | + | * [[RIBOSYN2-PWY]] |
− | + | ** '''8''' reactions found over '''9''' reactions in the full pathway | |
− | + | * [[PWY-6168]] | |
− | ** ''' | + | ** '''7''' reactions found over '''9''' reactions in the full pathway |
− | * [[PWY- | + | * [[PWY-6167]] |
− | ** ''' | + | ** '''5''' reactions found over '''10''' reactions in the full pathway |
− | * [[PWY- | ||
− | ** ''' | ||
{{#set: transcription-direction=positive}} | {{#set: transcription-direction=positive}} | ||
− | {{#set: right-end-position= | + | {{#set: right-end-position=369860}} |
− | {{#set: left-end-position= | + | {{#set: left-end-position=340317}} |
− | {{#set: centisome-position= | + | {{#set: centisome-position=62.615246 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=3}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=3}} |
Latest revision as of 11:08, 18 March 2021
Contents
Gene SJ02182
- transcription-direction:
- positive
- right-end-position:
- 369860
- left-end-position:
- 340317
- centisome-position:
- 62.615246
Organism(s) associated with this gene
Reaction(s) associated
- RIBOFLAVINSYNREDUC-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN-10057
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-14171
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- RIBOSYN2-PWY
- 8 reactions found over 9 reactions in the full pathway
- PWY-6168
- 7 reactions found over 9 reactions in the full pathway
- PWY-6167
- 5 reactions found over 10 reactions in the full pathway