Difference between revisions of "SJ10476"
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(Created page with "Category:gene == Gene SJ12593 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * 4.2.2.10-RXN ** Catego...") |
(Created page with "Category:gene == Gene SJ10476 == * transcription-direction: ** negative * right-end-position: ** 165723 * left-end-position: ** 153673 * centisome-position: ** 39.516106...") |
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(7 intermediate revisions by 3 users not shown) | |||
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[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ10476 == |
+ | * transcription-direction: | ||
+ | ** negative | ||
+ | * right-end-position: | ||
+ | ** 165723 | ||
+ | * left-end-position: | ||
+ | ** 153673 | ||
+ | * centisome-position: | ||
+ | ** 39.516106 | ||
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
+ | * [[1.1.1.145-RXN]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[DTDPGLUCDEHYDRAT-RXN]] | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
− | *** source: [[ | + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a |
− | * [[RXN- | + | * [[RXN-12693]] |
− | ** Category: [[ | + | ** Category: [[annotation]] |
− | *** source: [[ | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
+ | * [[RXN-12747]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-12789]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN66-342]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN66-350]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN66-353]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[UDP-GLUCURONATE-DECARBOXYLASE-RXN]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | </div> | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[PWY- | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
+ | * [[PWY-6808]] | ||
+ | ** '''1''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[PWY-7657]] | ||
+ | ** '''1''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY-7104]] | ||
+ | ** '''1''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[PWY-6973]] | ||
+ | ** '''1''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[PWY-6974]] | ||
+ | ** '''1''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY-6976]] | ||
+ | ** '''1''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY-6953]] | ||
+ | ** '''1''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-7414]] | ||
+ | ** '''1''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-7315]] | ||
+ | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-7318]] | ||
+ | ** '''1''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-6942]] | ||
+ | ** '''1''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-7440]] | ||
+ | ** '''1''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[PWY-7814]] | ||
+ | ** '''2''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-3221]] | ||
** '''1''' reactions found over '''n.a''' reactions in the full pathway | ** '''1''' reactions found over '''n.a''' reactions in the full pathway | ||
+ | * [[PWY-7413]] | ||
+ | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-7312]] | ||
+ | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-7316]] | ||
+ | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[DTDPRHAMSYN-PWY]] | ||
+ | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-7688]] | ||
+ | ** '''1''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-7301]] | ||
+ | ** '''2''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-6946]] | ||
+ | ** '''6''' reactions found over '''22''' reactions in the full pathway | ||
+ | * [[PWY-6944]] | ||
+ | ** '''2''' reactions found over '''25''' reactions in the full pathway | ||
+ | * [[PWY-6948]] | ||
+ | ** '''2''' reactions found over '''18''' reactions in the full pathway | ||
+ | * [[PWY66-378]] | ||
+ | ** '''3''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-7299]] | ||
+ | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-4821]] | ||
+ | ** '''2''' reactions found over '''1''' reactions in the full pathway | ||
+ | </div> | ||
+ | {{#set: transcription-direction=negative}} | ||
+ | {{#set: right-end-position=165723}} | ||
+ | {{#set: left-end-position=153673}} | ||
+ | {{#set: centisome-position=39.516106 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=9}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=26}} |
Latest revision as of 11:10, 18 March 2021
Contents
Gene SJ10476
- transcription-direction:
- negative
- right-end-position:
- 165723
- left-end-position:
- 153673
- centisome-position:
- 39.516106
Organism(s) associated with this gene
Reaction(s) associated
- 1.1.1.145-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- DTDPGLUCDEHYDRAT-RXN
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- Category: orthology
- RXN-12693
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-12747
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-12789
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN66-342
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN66-350
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN66-353
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- UDP-GLUCURONATE-DECARBOXYLASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-6808
- 1 reactions found over 9 reactions in the full pathway
- PWY-7657
- 1 reactions found over 7 reactions in the full pathway
- PWY-7104
- 1 reactions found over 8 reactions in the full pathway
- PWY-6973
- 1 reactions found over 9 reactions in the full pathway
- PWY-6974
- 1 reactions found over 7 reactions in the full pathway
- PWY-6976
- 1 reactions found over 7 reactions in the full pathway
- PWY-6953
- 1 reactions found over 5 reactions in the full pathway
- PWY-7414
- 1 reactions found over 5 reactions in the full pathway
- PWY-7315
- 1 reactions found over 4 reactions in the full pathway
- PWY-7318
- 1 reactions found over 5 reactions in the full pathway
- PWY-6942
- 1 reactions found over 6 reactions in the full pathway
- PWY-7440
- 1 reactions found over 8 reactions in the full pathway
- PWY-7814
- 2 reactions found over 6 reactions in the full pathway
- PWY-3221
- 1 reactions found over n.a reactions in the full pathway
- PWY-7413
- 1 reactions found over 4 reactions in the full pathway
- PWY-7312
- 1 reactions found over 4 reactions in the full pathway
- PWY-7316
- 1 reactions found over 4 reactions in the full pathway
- DTDPRHAMSYN-PWY
- 3 reactions found over 4 reactions in the full pathway
- PWY-7688
- 1 reactions found over 6 reactions in the full pathway
- PWY-7301
- 2 reactions found over 5 reactions in the full pathway
- PWY-6946
- 6 reactions found over 22 reactions in the full pathway
- PWY-6944
- 2 reactions found over 25 reactions in the full pathway
- PWY-6948
- 2 reactions found over 18 reactions in the full pathway
- PWY66-378
- 3 reactions found over 6 reactions in the full pathway
- PWY-7299
- 1 reactions found over 2 reactions in the full pathway
- PWY-4821
- 2 reactions found over 1 reactions in the full pathway