Difference between revisions of "CPD0-1422"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UROGENIIISYN-RXN UROGENIIISYN-RXN] == * direction: ** left-to-right * common-name: ** uroporphyrino...")
(Created page with "Category:metabolite == Metabolite CPD0-1422 == * common-name: ** dipalmitoyl phosphatidate * smiles: ** cccccccccccccccc(=o)occ(cop(=o)([o-])[o-])oc(ccccccccccccccc)=o * i...")
 
(8 intermediate revisions by 4 users not shown)
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[[Category:reaction]]
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[[Category:metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UROGENIIISYN-RXN UROGENIIISYN-RXN] ==
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== Metabolite CPD0-1422 ==
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* direction:
 
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** left-to-right
 
 
* common-name:
 
* common-name:
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** uroporphyrinogen iii synthase
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** dipalmitoyl phosphatidate
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* ec-number:
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* smiles:
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** [http://enzyme.expasy.org/EC/4.2.1.75 ec-4.2.1.75]
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** cccccccccccccccc(=o)occ(cop(=o)([o-])[o-])oc(ccccccccccccccc)=o
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== Reaction formula ==
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* inchi-key:
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* 1 [[HYDROXYMETHYLBILANE]][c] '''=>''' 1 [[UROPORPHYRINOGEN-III]][c] '''+''' 1 [[WATER]][c]
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** porpenfltbbhsg-mgbgtmovsa-l
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== Gene(s) associated with this reaction  ==
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* molecular-weight:
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* Gene: [[SJ19532]]
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** 646.883
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** Category: [[annotation]]
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== Reaction(s) known to consume the compound ==
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[PHOSPHATIDATE-PHOSPHATASE-RXN-CPD0-1422/WATER//CPD66-34/Pi.29.]]
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** Category: [[orthology]]
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== Reaction(s) known to produce the compound ==
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [[RXN0-6705]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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== Reaction(s) of unknown directionality ==
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== Pathway(s) ==
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{{#set: common-name=dipalmitoyl phosphatidate}}
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* [[PWY-5189]], tetrapyrrole biosynthesis II (from glycine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5189 PWY-5189]
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{{#set: inchi-key=inchikey=porpenfltbbhsg-mgbgtmovsa-l}}
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** '''3''' reactions found over '''4''' reactions in the full pathway
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{{#set: molecular-weight=646.883}}
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* [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5188 PWY-5188]
 
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** '''6''' reactions found over '''6''' reactions in the full pathway
 
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== Reconstruction information  ==
 
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== External links  ==
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18965 18965]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R03165 R03165]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P10746 P10746]
 
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** [http://www.uniprot.org/uniprot/P51163 P51163]
 
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** [http://www.uniprot.org/uniprot/P21248 P21248]
 
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** [http://www.uniprot.org/uniprot/Q58401 Q58401]
 
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** [http://www.uniprot.org/uniprot/P09126 P09126]
 
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** [http://www.uniprot.org/uniprot/Q59294 Q59294]
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=uroporphyrinogen iii synthase}}
 
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{{#set: ec-number=ec-4.2.1.75}}
 
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{{#set: nb gene associated=1}}
 
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{{#set: nb pathway associated=2}}
 
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{{#set: reconstruction category=orthology|annotation}}
 
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{{#set: reconstruction tool=pantograph|pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 

Latest revision as of 11:15, 18 March 2021

Metabolite CPD0-1422

  • common-name:
    • dipalmitoyl phosphatidate
  • smiles:
    • cccccccccccccccc(=o)occ(cop(=o)([o-])[o-])oc(ccccccccccccccc)=o
  • inchi-key:
    • porpenfltbbhsg-mgbgtmovsa-l
  • molecular-weight:
    • 646.883

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD0-1422&oldid=138632"