Difference between revisions of "PYRROLINECARBREDUCT-RXN"
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(Created page with "Category:reaction == Reaction RXN-16759 == * direction: ** reversible * common-name: ** holo-[acyl-carrier-protein] synthase * ec-number: ** [http://enzyme.expasy.org/EC/2...") |
(Created page with "Category:reaction == Reaction PYRROLINECARBREDUCT-RXN == * direction: ** left-to-right * common-name: ** pyrroline-5-carboxylate reductase * ec-number: ** [http://enzyme.e...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction RXN | + | == Reaction PYRROLINECARBREDUCT-RXN == |
* direction: | * direction: | ||
− | ** | + | ** left-to-right |
* common-name: | * common-name: | ||
− | ** | + | ** pyrroline-5-carboxylate reductase |
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/1.5.1.2 ec-1.5.1.2] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[L-DELTA1-PYRROLINE_5-CARBOXYLATE]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[PRO]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ22264]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
+ | * Gene: [[SJ15062]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
− | * Gene: [[ | + | * Gene: [[SJ11815]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
+ | * [[PWY-3341]], L-proline biosynthesis III (from L-ornithine): | ||
+ | ** '''4''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PROSYN-PWY]], L-proline biosynthesis I (from L-glutamate): | ||
+ | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-6344]], L-arginine degradation XIV (oxidative Stickland reaction): | ||
+ | ** '''2''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-4981]], L-proline biosynthesis II (from arginine): | ||
+ | ** '''3''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[ARG-PRO-PWY]], L-arginine degradation VI (arginase 2 pathway): | ||
+ | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
− | {{#set: direction= | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
− | {{#set: common-name= | + | * METANETX-RXN : MNXR116172 |
− | {{#set: ec-number=ec- | + | * RHEA: |
− | {{#set: nb gene associated= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14107 14107] |
− | {{#set: nb pathway associated= | + | * LIGAND-RXN: |
− | {{#set: reconstruction category=annotation | + | ** [http://www.genome.jp/dbget-bin/www_bget?R01251 R01251] |
− | {{#set: reconstruction tool=pathwaytools | + | * UNIPROT: |
+ | ** [http://www.uniprot.org/uniprot/P32322 P32322] | ||
+ | ** [http://www.uniprot.org/uniprot/P27771 P27771] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9CEF7 Q9CEF7] | ||
+ | ** [http://www.uniprot.org/uniprot/P14383 P14383] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PNL8 Q9PNL8] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JWW2 Q9JWW2] | ||
+ | ** [http://www.uniprot.org/uniprot/Q12740 Q12740] | ||
+ | ** [http://www.uniprot.org/uniprot/P22008 P22008] | ||
+ | ** [http://www.uniprot.org/uniprot/P54904 P54904] | ||
+ | ** [http://www.uniprot.org/uniprot/P0A9L8 P0A9L8] | ||
+ | ** [http://www.uniprot.org/uniprot/P17817 P17817] | ||
+ | ** [http://www.uniprot.org/uniprot/P32263 P32263] | ||
+ | ** [http://www.uniprot.org/uniprot/Q12641 Q12641] | ||
+ | ** [http://www.uniprot.org/uniprot/P46725 P46725] | ||
+ | ** [http://www.uniprot.org/uniprot/P74572 P74572] | ||
+ | ** [http://www.uniprot.org/uniprot/Q04708 Q04708] | ||
+ | </div> | ||
+ | {{#set: direction=left-to-right}} | ||
+ | {{#set: common-name=pyrroline-5-carboxylate reductase}} | ||
+ | {{#set: ec-number=ec-1.5.1.2}} | ||
+ | {{#set: nb gene associated=3}} | ||
+ | {{#set: nb pathway associated=5}} | ||
+ | {{#set: reconstruction category=orthology|annotation}} | ||
+ | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=saccharina_japonica_genome | + | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}} |
Latest revision as of 11:20, 18 March 2021
Contents
Reaction PYRROLINECARBREDUCT-RXN
- direction:
- left-to-right
- common-name:
- pyrroline-5-carboxylate reductase
- ec-number:
Reaction formula
- 1 L-DELTA1-PYRROLINE_5-CARBOXYLATE[c] + 1 NADH-P-OR-NOP[c] + 2 PROTON[c] => 1 NAD-P-OR-NOP[c] + 1 PRO[c]
Gene(s) associated with this reaction
- Gene: SJ22264
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ15062
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ11815
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-3341, L-proline biosynthesis III (from L-ornithine):
- 4 reactions found over 3 reactions in the full pathway
- PROSYN-PWY, L-proline biosynthesis I (from L-glutamate):
- 3 reactions found over 4 reactions in the full pathway
- PWY-6344, L-arginine degradation XIV (oxidative Stickland reaction):
- 2 reactions found over 6 reactions in the full pathway
- PWY-4981, L-proline biosynthesis II (from arginine):
- 3 reactions found over 2 reactions in the full pathway
- ARG-PRO-PWY, L-arginine degradation VI (arginase 2 pathway):
- 3 reactions found over 4 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links