Difference between revisions of "SERINE-O-ACETTRAN-RXN"
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(Created page with "Category:reaction == Reaction 2.7.10.1-RXN == * direction: ** left-to-right * common-name: ** protein serine/threonine/tyrosine kinase ** non-membrane spanning protein tyr...") |
(Created page with "Category:reaction == Reaction SERINE-O-ACETTRAN-RXN == * direction: ** left-to-right * common-name: ** serine acetyltransferase * ec-number: ** [http://enzyme.expasy.org/E...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction SERINE-O-ACETTRAN-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
− | ** | + | ** serine acetyltransferase |
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* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/2. | + | ** [http://enzyme.expasy.org/EC/2.3.1.30 ec-2.3.1.30] |
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== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[ACETYL-COA]][c] '''+''' 1 [[SER]][c] '''=>''' 1 [[ACETYLSERINE]][c] '''+''' 1 [[CO-A]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
− | * Gene: [[ | + | * Gene: [[SJ14691]] |
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** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
− | * Gene: [[ | + | * Gene: [[SJ15518]] |
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** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
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** Category: [[orthology]] | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
− | * Gene: [[ | + | * Gene: [[SJ00718]] |
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** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
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** Category: [[orthology]] | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
− | * Gene: [[ | + | * Gene: [[SJ14890]] |
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** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
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** Category: [[orthology]] | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
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</div> | </div> | ||
== Pathway(s) == | == Pathway(s) == | ||
+ | * [[PWY-7870]], L-cysteine biosynthesis VII (from S-sulfo-L-cysteine): | ||
+ | ** '''2''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-7274]], D-cycloserine biosynthesis: | ||
+ | ** '''1''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[CYSTSYN-PWY]], L-cysteine biosynthesis I: | ||
+ | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-6936]], seleno-amino acid biosynthesis (plants): | ||
+ | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
+ | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
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== External links == | == External links == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
+ | * METANETX-RXN : MNXR104275 | ||
* RHEA: | * RHEA: | ||
− | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24560 24560] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R00586 R00586] |
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/Q39533 Q39533] | ||
+ | ** [http://www.uniprot.org/uniprot/Q06750 Q06750] | ||
+ | ** [http://www.uniprot.org/uniprot/P71405 P71405] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JR86 Q9JR86] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PPF6 Q9PPF6] | ||
+ | ** [http://www.uniprot.org/uniprot/P23145 P23145] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9CEI8 Q9CEI8] | ||
+ | ** [http://www.uniprot.org/uniprot/P43886 P43886] | ||
+ | ** [http://www.uniprot.org/uniprot/P32003 P32003] | ||
+ | ** [http://www.uniprot.org/uniprot/P29847 P29847] | ||
+ | ** [http://www.uniprot.org/uniprot/Q42588 Q42588] | ||
+ | ** [http://www.uniprot.org/uniprot/Q39218 Q39218] | ||
+ | ** [http://www.uniprot.org/uniprot/Q42538 Q42538] | ||
+ | ** [http://www.uniprot.org/uniprot/P74089 P74089] | ||
+ | ** [http://www.uniprot.org/uniprot/Q8W2B8 Q8W2B8] | ||
+ | ** [http://www.uniprot.org/uniprot/Q8S895 Q8S895] | ||
+ | ** [http://www.uniprot.org/uniprot/P93544 P93544] | ||
+ | ** [http://www.uniprot.org/uniprot/O69218 O69218] | ||
+ | ** [http://www.uniprot.org/uniprot/O32979 O32979] | ||
+ | ** [http://www.uniprot.org/uniprot/P0A9D4 P0A9D4] | ||
+ | </div> | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: common-name= | + | {{#set: common-name=serine acetyltransferase}} |
− | {{#set: ec-number=ec-2. | + | {{#set: ec-number=ec-2.3.1.30}} |
− | {{#set: nb gene associated= | + | {{#set: nb gene associated=4}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=4}} |
− | {{#set: reconstruction category=annotation | + | {{#set: reconstruction category=orthology|annotation}} |
− | {{#set: reconstruction tool=pathwaytools | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source= | + | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}} |
Latest revision as of 11:24, 18 March 2021
Contents
Reaction SERINE-O-ACETTRAN-RXN
- direction:
- left-to-right
- common-name:
- serine acetyltransferase
- ec-number:
Reaction formula
- 1 ACETYL-COA[c] + 1 SER[c] => 1 ACETYLSERINE[c] + 1 CO-A[c]
Gene(s) associated with this reaction
- Gene: SJ14691
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ15518
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ00718
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ14890
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-7870, L-cysteine biosynthesis VII (from S-sulfo-L-cysteine):
- 2 reactions found over 4 reactions in the full pathway
- PWY-7274, D-cycloserine biosynthesis:
- 1 reactions found over 6 reactions in the full pathway
- CYSTSYN-PWY, L-cysteine biosynthesis I:
- 2 reactions found over 2 reactions in the full pathway
- PWY-6936, seleno-amino acid biosynthesis (plants):
- 5 reactions found over 5 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links