Difference between revisions of "SJ12281"
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(Created page with "Category:gene == Gene SJ00640 == * transcription-direction: ** negative * right-end-position: ** 152039 * left-end-position: ** 144762 * centisome-position: ** 88.04404...") |
(Created page with "Category:gene == Gene SJ10813 == * transcription-direction: ** positive * right-end-position: ** 154233 * left-end-position: ** 147239 * centisome-position: ** 38.41201...") |
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Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ10813 == |
* transcription-direction: | * transcription-direction: | ||
− | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 154233 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 147239 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 38.41201 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | * [[GLUTAMATE-SYNTHASE-NADH-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | ** Category: [[ | + | * [[GLUTAMATESYN-RXN]] |
− | *** source: [[ | + | ** Category: [[annotation]] |
− | {{#set: transcription-direction= | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
− | {{#set: right-end-position= | + | * [[GLUTAMIN-RXN]] |
− | {{#set: left-end-position= | + | ** Category: [[annotation]] |
− | {{#set: centisome-position= | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
+ | * [[GLUTDEHYD-RXN]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | == Pathway(s) associated == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
+ | * [[PWY-6963]] | ||
+ | ** '''4''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[GLUGLNSYN-PWY]] | ||
+ | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
+ | * [[GLUTSYN-PWY]] | ||
+ | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
+ | * [[GLUTAMINEFUM-PWY]] | ||
+ | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
+ | * [[CITRULBIO-PWY]] | ||
+ | ** '''7''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[GLUTAMINDEG-PWY]] | ||
+ | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
+ | * [[GLUTSYNIII-PWY]] | ||
+ | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
+ | * [[PWY-5675]] | ||
+ | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY490-3]] | ||
+ | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-5913]] | ||
+ | ** '''10''' reactions found over '''11''' reactions in the full pathway | ||
+ | </div> | ||
+ | {{#set: transcription-direction=positive}} | ||
+ | {{#set: right-end-position=154233}} | ||
+ | {{#set: left-end-position=147239}} | ||
+ | {{#set: centisome-position=38.41201 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=4}} |
+ | {{#set: nb pathway associated=10}} |
Revision as of 14:20, 26 August 2019
Contents
Gene SJ10813
- transcription-direction:
- positive
- right-end-position:
- 154233
- left-end-position:
- 147239
- centisome-position:
- 38.41201
Organism(s) associated with this gene
Reaction(s) associated
- GLUTAMATE-SYNTHASE-NADH-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- GLUTAMATESYN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- GLUTAMIN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- GLUTDEHYD-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-6963
- 4 reactions found over 2 reactions in the full pathway
- GLUGLNSYN-PWY
- 1 reactions found over 1 reactions in the full pathway
- GLUTSYN-PWY
- 1 reactions found over 1 reactions in the full pathway
- GLUTAMINEFUM-PWY
- 1 reactions found over 1 reactions in the full pathway
- CITRULBIO-PWY
- 7 reactions found over 8 reactions in the full pathway
- GLUTAMINDEG-PWY
- 1 reactions found over 1 reactions in the full pathway
- GLUTSYNIII-PWY
- 1 reactions found over 1 reactions in the full pathway
- PWY-5675
- 4 reactions found over 4 reactions in the full pathway
- PWY490-3
- 3 reactions found over 4 reactions in the full pathway
- PWY-5913
- 10 reactions found over 11 reactions in the full pathway