Difference between revisions of "CPD-15189"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UROGENIIISYN-RXN UROGENIIISYN-RXN] == * direction: ** left-to-right * common-name: ** uroporphyrino...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALLOPHANATE-HYDROLASE-RXN ALLOPHANATE-HYDROLASE-RXN] == * direction: ** left-to-right * ec-number:...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UROGENIIISYN-RXN UROGENIIISYN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALLOPHANATE-HYDROLASE-RXN ALLOPHANATE-HYDROLASE-RXN] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** uroporphyrinogen iii synthase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.2.1.75 ec-4.2.1.75]
+
** [http://enzyme.expasy.org/EC/3.5.1.54 ec-3.5.1.54]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[HYDROXYMETHYLBILANE]][c] '''=>''' 1 [[UROPORPHYRINOGEN-III]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[CPD-578]][c] '''+''' 3 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''=>''' 2 [[AMMONIUM]][c] '''+''' 2 [[CARBON-DIOXIDE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ19532]]
+
* Gene: [[SJ05942]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5189]], tetrapyrrole biosynthesis II (from glycine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5189 PWY-5189]
+
* [[PWY-5703]], urea degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5703 PWY-5703]
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
** '''1''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5188 PWY-5188]
+
* [[PWY-5169]], cyanuric acid degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5169 PWY-5169]
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
** '''1''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18965 18965]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19030 19030]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03165 R03165]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00005 R00005]
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P10746 P10746]
 
−
** [http://www.uniprot.org/uniprot/P51163 P51163]
 
−
** [http://www.uniprot.org/uniprot/P21248 P21248]
 
−
** [http://www.uniprot.org/uniprot/Q58401 Q58401]
 
−
** [http://www.uniprot.org/uniprot/P09126 P09126]
 
−
** [http://www.uniprot.org/uniprot/Q59294 Q59294]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=uroporphyrinogen iii synthase}}
+
{{#set: ec-number=ec-3.5.1.54}}
−
{{#set: ec-number=ec-4.2.1.75}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=2}}
 
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Revision as of 14:24, 26 August 2019

Reaction ALLOPHANATE-HYDROLASE-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5703, urea degradation I: PWY-5703
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-5169, cyanuric acid degradation II: PWY-5169
    • 1 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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