Difference between revisions of "RXN-4311"
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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TAGAALDOL-RXN TAGAALDOL-RXN] == * direction: ** left-to-right * common-name: ** tagatose-1,6-bispho...") |
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7953 RXN-7953] == * direction: ** left-to-right * common-name: ** [dermatan]-n-acetylgalactosam...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7953 RXN-7953] == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
| − | ** | + | ** [dermatan]-n-acetylgalactosamine 4-sulfate 6-o-sulfotransferase |
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/2.8.2.33 ec-2.8.2.33] |
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[Dermatan-NAcGal-4-sulfates]][c] '''+''' 1 [[PAPS]][c] '''=>''' 1 [[3-5-ADP]][c] '''+''' 1 [[Dermatan-NAcGal-46-disulfates]][c] '''+''' 1 [[PROTON]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ21107]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| − | * [[ | + | * [[PWY-6568]], dermatan sulfate biosynthesis (late stages): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6568 PWY-6568] |
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
** '''2''' reactions found over '''4''' reactions in the full pathway | ** '''2''' reactions found over '''4''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
| − | |||
| − | |||
* LIGAND-RXN: | * LIGAND-RXN: | ||
| − | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R07288 R07288] |
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: common-name= | + | {{#set: common-name=[dermatan]-n-acetylgalactosamine 4-sulfate 6-o-sulfotransferase}} |
| − | {{#set: ec-number=ec- | + | {{#set: ec-number=ec-2.8.2.33}} |
{{#set: nb gene associated=1}} | {{#set: nb gene associated=1}} | ||
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=1}} |
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
{{#set: reconstruction source=saccharina_japonica_genome}} | {{#set: reconstruction source=saccharina_japonica_genome}} | ||
Revision as of 14:26, 26 August 2019
Contents
Reaction RXN-7953
- direction:
- left-to-right
- common-name:
- [dermatan]-n-acetylgalactosamine 4-sulfate 6-o-sulfotransferase
- ec-number:
Reaction formula
- 1 Dermatan-NAcGal-4-sulfates[c] + 1 PAPS[c] => 1 3-5-ADP[c] + 1 Dermatan-NAcGal-46-disulfates[c] + 1 PROTON[c]
Gene(s) associated with this reaction
- Gene: SJ21107
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-6568, dermatan sulfate biosynthesis (late stages): PWY-6568
- 2 reactions found over 4 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
- LIGAND-RXN:
Property "Common-name" (as page type) with input value "dermatan]-n-acetylgalactosamine 4-sulfate 6-o-sulfotransferase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
