Difference between revisions of "DHFR2i"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENOSYLHOMOCYSTEINE-NUCLEOSIDASE-RXN ADENOSYLHOMOCYSTEINE-NUCLEOSIDASE-RXN] == * direction: ** lef...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10740 RXN-10740] == * direction: ** left-to-right * common-name: ** udp-4-keto-rhamnose-4-keto-...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENOSYLHOMOCYSTEINE-NUCLEOSIDASE-RXN ADENOSYLHOMOCYSTEINE-NUCLEOSIDASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10740 RXN-10740] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** adenosylhomocysteine nucleosidase
+
** udp-4-keto-rhamnose-4-keto-reductase
 +
** udp-l-rhamnose synthase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.2.2.9 ec-3.2.2.9]
+
** [http://enzyme.expasy.org/EC/1.1.1 ec-1.1.1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ADENINE]][c] '''+''' 1 [[CPD-564]][c]
+
* 1 [[CPD-11540]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[UDP-L-RHAMNOSE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ02916]]
+
* Gene: [[SJ16241]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ14933]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ07466]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6153]], autoinducer AI-2 biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6153 PWY-6153]
+
* [[PWY-3261]], UDP-β-L-rhamnose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3261 PWY-3261]
−
** '''1''' reactions found over '''5''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-6154]], autoinducer AI-2 biosynthesis II (Vibrio): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6154 PWY-6154]
 
−
** '''1''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-6151]], S-adenosyl-L-methionine cycle I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6151 PWY-6151]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-I9]], L-cysteine biosynthesis VI (from L-methionine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-I9 PWY-I9]
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17806 17806]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00194 R00194]
+
** [http://www.genome.jp/dbget-bin/www_bget?R08705 R08705]
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q9JV64 Q9JV64]
 
−
** [http://www.uniprot.org/uniprot/Q9PJ10 Q9PJ10]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=adenosylhomocysteine nucleosidase}}
+
{{#set: common-name=udp-4-keto-rhamnose-4-keto-reductase|udp-l-rhamnose synthase}}
−
{{#set: ec-number=ec-3.2.2.9}}
+
{{#set: ec-number=ec-1.1.1}}
−
{{#set: nb gene associated=3}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 14:28, 26 August 2019

Reaction RXN-10740

  • direction:
    • left-to-right
  • common-name:
    • udp-4-keto-rhamnose-4-keto-reductase
    • udp-l-rhamnose synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-3261, UDP-β-L-rhamnose biosynthesis: PWY-3261
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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