Difference between revisions of "SJ07159"

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(Created page with "Category:gene == Gene SJ10418 == * transcription-direction: ** positive * right-end-position: ** 172479 * left-end-position: ** 116451 * centisome-position: ** 29.735561...")
(Created page with "Category:gene == Gene SJ05741 == * transcription-direction: ** negative * right-end-position: ** 113957 * left-end-position: ** 100900 * centisome-position: ** 20.61603...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ10418 ==
+
== Gene SJ05741 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 172479
+
** 113957
 
* left-end-position:
 
* left-end-position:
−
** 116451
+
** 100900
 
* centisome-position:
 
* centisome-position:
−
** 29.735561    
+
** 20.61603    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[GPPSYN-RXN]]
+
* [[3.2.1.21-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[3.2.1.58-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-11486]]
+
* [[RXN-10769]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10773]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-13602]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-13603]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14179]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-5341]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-8036]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-9003]]
+
* [[RXN-9674]]
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-9384]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN0-5180]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
</div>
 
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-6788]]
−
* [[PWY-6383]]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7410]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7102]]
 
−
** '''3''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-6859]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7736]]
 
−
** '''3''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-5122]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY-7141]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-7659]]
 
−
** '''1''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-7709]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-5123]]
 
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7182]]
+
* [[PWY-7091]]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7092]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-3121]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-6520]]
+
* [[PWY-5176]]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''1''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7235]]
+
* [[PWY-6002]]
−
** '''3''' reactions found over '''n.a''' reactions in the full pathway
 
−
* [[PWY3O-19]]
 
−
** '''4''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-5815]]
 
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-5805]]
+
{{#set: transcription-direction=negative}}
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
{{#set: right-end-position=113957}}
−
</div>
+
{{#set: left-end-position=100900}}
−
{{#set: transcription-direction=positive}}
+
{{#set: centisome-position=20.61603   }}
−
{{#set: right-end-position=172479}}
 
−
{{#set: left-end-position=116451}}
 
−
{{#set: centisome-position=29.735561   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=10}}
−
{{#set: nb pathway associated=16}}
+
{{#set: nb pathway associated=6}}

Revision as of 09:26, 27 August 2019

Gene SJ05741

  • transcription-direction:
    • negative
  • right-end-position:
    • 113957
  • left-end-position:
    • 100900
  • centisome-position:
    • 20.61603

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6788
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7091
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-7092
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-3121
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-5176
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-6002
    • 1 reactions found over 2 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ07159&oldid=30588"