Difference between revisions of "SJ18408"
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(Created page with "Category:gene == Gene SJ06127 == * transcription-direction: ** negative * right-end-position: ** 41834 * left-end-position: ** 34674 * centisome-position: ** 41.501892...") |
(Created page with "Category:gene == Gene SJ10463 == * transcription-direction: ** positive * right-end-position: ** 24317 * left-end-position: ** 23547 * centisome-position: ** 78.731445...") |
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[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ10463 == |
* transcription-direction: | * transcription-direction: | ||
− | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 24317 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 23547 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 78.731445 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | + | * [[4-NITROPHENYLPHOSPHATASE-RXN]] | |
− | * [[ | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[ | + | * [[F16BDEPHOS-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * | + | * [[SEDOHEPTULOSE-BISPHOSPHATASE-RXN]] |
− | |||
− | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[ | + | * [[SUGAR-PHOSPHATASE-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
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== Pathway(s) associated == | == Pathway(s) associated == | ||
− | + | * [[P185-PWY]] | |
− | * [[ | + | ** '''11''' reactions found over '''12''' reactions in the full pathway |
− | ** ''' | + | * [[PWY66-399]] |
− | * [[PWY66- | + | ** '''11''' reactions found over '''12''' reactions in the full pathway |
− | + | * [[SUCSYN-PWY]] | |
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− | ** ''' | ||
− | * [[ | ||
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** '''6''' reactions found over '''7''' reactions in the full pathway | ** '''6''' reactions found over '''7''' reactions in the full pathway | ||
− | * [[ | + | * [[CALVIN-PWY]] |
− | + | ** '''12''' reactions found over '''13''' reactions in the full pathway | |
− | + | * [[GLUCONEO-PWY]] | |
− | ** ''' | + | ** '''12''' reactions found over '''13''' reactions in the full pathway |
− | * [[ | + | * [[PWY-5484]] |
− | + | ** '''10''' reactions found over '''11''' reactions in the full pathway | |
− | + | * [[GLYCOLYSIS]] | |
− | ** ''' | + | ** '''11''' reactions found over '''12''' reactions in the full pathway |
− | * [[PWY- | + | {{#set: transcription-direction=positive}} |
− | ** ''' | + | {{#set: right-end-position=24317}} |
− | + | {{#set: left-end-position=23547}} | |
− | + | {{#set: centisome-position=78.731445 }} | |
− | * [[ | ||
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− | ** | ||
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− | {{#set: transcription-direction= | ||
− | {{#set: right-end-position= | ||
− | {{#set: left-end-position= | ||
− | {{#set: centisome-position= | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=4}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=7}} |
Revision as of 09:26, 27 August 2019
Contents
Gene SJ10463
- transcription-direction:
- positive
- right-end-position:
- 24317
- left-end-position:
- 23547
- centisome-position:
- 78.731445
Organism(s) associated with this gene
Reaction(s) associated
- 4-NITROPHENYLPHOSPHATASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- F16BDEPHOS-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- SEDOHEPTULOSE-BISPHOSPHATASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- SUGAR-PHOSPHATASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- P185-PWY
- 11 reactions found over 12 reactions in the full pathway
- PWY66-399
- 11 reactions found over 12 reactions in the full pathway
- SUCSYN-PWY
- 6 reactions found over 7 reactions in the full pathway
- CALVIN-PWY
- 12 reactions found over 13 reactions in the full pathway
- GLUCONEO-PWY
- 12 reactions found over 13 reactions in the full pathway
- PWY-5484
- 10 reactions found over 11 reactions in the full pathway
- GLYCOLYSIS
- 11 reactions found over 12 reactions in the full pathway