Difference between revisions of "SJ04393"

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(Created page with "Category:gene == Gene SJ20207 == * transcription-direction: ** negative * right-end-position: ** 141210 * left-end-position: ** 133779 * centisome-position: ** 63.32404...")
(Created page with "Category:gene == Gene SJ14627 == * transcription-direction: ** positive * right-end-position: ** 134363 * left-end-position: ** 129662 * centisome-position: ** 41.629852...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ20207 ==
+
== Gene SJ14627 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 141210
+
** 134363
 
* left-end-position:
 
* left-end-position:
−
** 133779
+
** 129662
 
* centisome-position:
 
* centisome-position:
−
** 63.32404    
+
** 41.629852    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PYRNUTRANSHYDROGEN-RXN]]
+
* [[3.1.3.16-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[PGPPHOSPHA-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[PHOSPHATIDYLINOSITOL-BISPHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[PROTEIN-TYROSINE-PHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-13313]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[TRANS-RXN0-277]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-5083]]
+
* [[PWY4FS-7]]
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
** '''3''' reactions found over '''2''' reactions in the full pathway
−
* [[NADPHOS-DEPHOS-PWY]]
+
* [[PWY-7817]]
 +
** '''6''' reactions found over '''16''' reactions in the full pathway
 +
* [[PWY0-1545]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5269]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5668]]
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[NADPHOS-DEPHOS-PWY-1]]
+
* [[PWY4FS-8]]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''3''' reactions found over '''2''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
* [[PWY-6368]]
−
{{#set: right-end-position=141210}}
+
** '''6''' reactions found over '''9''' reactions in the full pathway
−
{{#set: left-end-position=133779}}
+
{{#set: transcription-direction=positive}}
−
{{#set: centisome-position=63.32404   }}
+
{{#set: right-end-position=134363}}
 +
{{#set: left-end-position=129662}}
 +
{{#set: centisome-position=41.629852   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=6}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=7}}

Revision as of 09:26, 27 August 2019

Gene SJ14627

  • transcription-direction:
    • positive
  • right-end-position:
    • 134363
  • left-end-position:
    • 129662
  • centisome-position:
    • 41.629852

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY4FS-7
    • 3 reactions found over 2 reactions in the full pathway
  • PWY-7817
    • 6 reactions found over 16 reactions in the full pathway
  • PWY0-1545
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5269
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-5668
    • 3 reactions found over 3 reactions in the full pathway
  • PWY4FS-8
    • 3 reactions found over 2 reactions in the full pathway
  • PWY-6368
    • 6 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ04393&oldid=31613"