Difference between revisions of "SJ20307"

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(Created page with "Category:gene == Gene SJ14925 == * transcription-direction: ** positive * right-end-position: ** 31733 * left-end-position: ** 21400 * centisome-position: ** 7.0236936...")
(Created page with "Category:gene == Gene SJ20083 == * transcription-direction: ** negative * right-end-position: ** 60499 * left-end-position: ** 28589 * centisome-position: ** 13.377224...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ14925 ==
+
== Gene SJ20083 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 31733
+
** 60499
 
* left-end-position:
 
* left-end-position:
−
** 21400
+
** 28589
 
* centisome-position:
 
* centisome-position:
−
** 7.0236936    
+
** 13.377224    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PYRUVDEH-RXN]]
+
* [[RXN-11856]]
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-12508]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12583]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN0-1134]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7384]]
+
* [[PWY-6829]]
−
** '''6''' reactions found over '''10''' reactions in the full pathway
+
** '''11''' reactions found over '''15''' reactions in the full pathway
−
* [[GLYCOLYSIS-TCA-GLYOX-BYPASS]]
+
{{#set: transcription-direction=negative}}
−
** '''3''' reactions found over '''1''' reactions in the full pathway
+
{{#set: right-end-position=60499}}
−
* [[PWY-7218]]
+
{{#set: left-end-position=28589}}
−
** '''7''' reactions found over '''4''' reactions in the full pathway
+
{{#set: centisome-position=13.377224   }}
−
* [[PWY-5482]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-5537]]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-6886]]
 
−
** '''8''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PYRUVDEHYD-PWY]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=31733}}
 
−
{{#set: left-end-position=21400}}
 
−
{{#set: centisome-position=7.0236936   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=1}}

Revision as of 09:27, 27 August 2019

Gene SJ20083

  • transcription-direction:
    • negative
  • right-end-position:
    • 60499
  • left-end-position:
    • 28589
  • centisome-position:
    • 13.377224

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6829
    • 11 reactions found over 15 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ20307&oldid=32227"