Difference between revisions of "TROPINE"

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(Created page with "Category:gene == Gene SJ05357 == * transcription-direction: ** negative * right-end-position: ** 293019 * left-end-position: ** 288900 * centisome-position: ** 58.19716...")
(Created page with "Category:gene == Gene SJ05428 == * transcription-direction: ** positive * right-end-position: ** 164048 * left-end-position: ** 163614 * centisome-position: ** 32.98184...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ05357 ==
+
== Gene SJ05428 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 293019
+
** 164048
 
* left-end-position:
 
* left-end-position:
−
** 288900
+
** 163614
 
* centisome-position:
 
* centisome-position:
−
** 58.19716    
+
** 32.98184    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[RNA-DIRECTED-DNA-POLYMERASE-RXN]]
−
* [[HOMOSERDEAM-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[LCYSDESULF-RXN]]
+
{{#set: transcription-direction=positive}}
−
** Category: [[annotation]]
+
{{#set: right-end-position=164048}}
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: left-end-position=163614}}
−
* [[O-SUCCHOMOSERLYASE-RXN]]
+
{{#set: centisome-position=32.98184   }}
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-14048]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-14049]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-15129]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-15130]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
−
== Pathway(s) associated ==
 
−
* [[PWY66-426]]
 
−
** '''2''' reactions found over '''6''' reactions in the full pathway
 
−
* [[HOMOSER-METSYN-PWY]]
 
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-I9]]
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-801]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[HOMOCYSDEGR-PWY]]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[LCYSDEG-PWY]]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=293019}}
 
−
{{#set: left-end-position=288900}}
 
−
{{#set: centisome-position=58.19716   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=7}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=6}}
 

Revision as of 09:28, 27 August 2019

Gene SJ05428

  • transcription-direction:
    • positive
  • right-end-position:
    • 164048
  • left-end-position:
    • 163614
  • centisome-position:
    • 32.98184

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=TROPINE&oldid=33141"