Difference between revisions of "4-ALPHA-METHYL-5-ALPHA-CHOLEST-7-EN-3-ON"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11860 RXN-11860] == * direction: ** left-to-right * common-name: ** trna (cytidine-2'-o)-ribose...")
(Created page with "Category:gene == Gene SJ00229 == * transcription-direction: ** negative * right-end-position: ** 73386 * left-end-position: ** 62485 * centisome-position: ** 10.967937...")
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11860 RXN-11860] ==
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== Gene SJ00229 ==
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* direction:
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* transcription-direction:
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** left-to-right
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** negative
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* common-name:
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* right-end-position:
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** trna (cytidine-2'-o)-ribose methyltransferase
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** 73386
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* ec-number:
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* left-end-position:
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** [http://enzyme.expasy.org/EC/2.1.1.207 ec-2.1.1.207]
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** 62485
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== Reaction formula ==
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* centisome-position:
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* 1 [[Cytidine-34-tRNAs]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[2-O-Methylcytidine-34-tRNAs]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c]
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** 10.967937   
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== Gene(s) associated with this reaction  ==
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== Organism(s) associated with this gene  ==
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* Gene: [[SJ09745]]
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) associated ==
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* [[GLYOXIII-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s)  ==
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* [[THIAZOLSYN3-RXN]]
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== Reconstruction information  ==
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** Category: [[orthology]]
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== External links  ==
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== Pathway(s) associated ==
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* RHEA:
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* [[PWY-7357]]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=43085 43085]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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{{#set: direction=left-to-right}}
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* [[PWY-7356]]
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{{#set: common-name=trna (cytidine-2'-o)-ribose methyltransferase}}
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** '''6''' reactions found over '''7''' reactions in the full pathway
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{{#set: ec-number=ec-2.1.1.207}}
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* [[PWY-6897]]
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{{#set: nb gene associated=1}}
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** '''3''' reactions found over '''3''' reactions in the full pathway
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{{#set: nb pathway associated=0}}
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{{#set: transcription-direction=negative}}
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{{#set: reconstruction category=annotation}}
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{{#set: right-end-position=73386}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: left-end-position=62485}}
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{{#set: reconstruction comment=n.a}}
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{{#set: centisome-position=10.967937    }}
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{{#set: reconstruction source=saccharina_japonica_genome}}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=2}}
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{{#set: nb pathway associated=3}}

Revision as of 09:28, 27 August 2019

Gene SJ00229

  • transcription-direction:
    • negative
  • right-end-position:
    • 73386
  • left-end-position:
    • 62485
  • centisome-position:
    • 10.967937

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7357
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-7356
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-6897
    • 3 reactions found over 3 reactions in the full pathway




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