Difference between revisions of "DIHYDROXYNAPHTHOATE"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.2.23-RXN 3.2.2.23-RXN] == * direction: ** left-to-right * common-name: ** oxidized purine nucle...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7658 RXN-7658] == * direction: ** reversible * common-name: ** geranylgeranyl diphosphate reduc...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.2.23-RXN 3.2.2.23-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7658 RXN-7658] ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** oxidized purine nucleobase lesion dna n-glycosylase
+
** geranylgeranyl diphosphate reductase
−
** formamidopyrimidine dna glycosylase
 
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/3.2.2.23 ec-3.2.2.23]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[DNA-containing-diamino-hydro-formamidops]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-16491]][c] '''+''' 1 [[DNA-containing-aPurinic-Sites]][c]
+
* 1 [[CPD-7002]][c] '''+''' 1 [[NADP]][c] '''<=>''' 1 [[GERANYLGERANYL-PP]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ18415]]
+
* Gene: [[SJ15264]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ12532]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ12275]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-5063]], phytyl diphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5063 PWY-5063]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
+
* LIGAND-RXN:
−
** [http://www.uniprot.org/uniprot/P44948 P44948]
+
** [http://www.genome.jp/dbget-bin/www_bget?R08754 R08754]
−
** [http://www.uniprot.org/uniprot/P57014 P57014]
+
{{#set: direction=reversible}}
−
** [http://www.uniprot.org/uniprot/P05523 P05523]
+
{{#set: common-name=geranylgeranyl diphosphate reductase}}
−
** [http://www.uniprot.org/uniprot/P19210 P19210]
+
{{#set: nb gene associated=1}}
−
** [http://www.uniprot.org/uniprot/P74290 P74290]
+
{{#set: nb pathway associated=1}}
−
** [http://www.uniprot.org/uniprot/O69470 O69470]
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: direction=left-to-right}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: common-name=oxidized purine nucleobase lesion dna n-glycosylase|formamidopyrimidine dna glycosylase}}
 
−
{{#set: ec-number=ec-3.2.2.23}}
 
−
{{#set: nb gene associated=3}}
 
−
{{#set: nb pathway associated=0}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Revision as of 09:29, 27 August 2019

Reaction RXN-7658

  • direction:
    • reversible
  • common-name:
    • geranylgeranyl diphosphate reductase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5063, phytyl diphosphate biosynthesis: PWY-5063
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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