Difference between revisions of "16S-rRNA-N3-methyluracil1498"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=THREONINE-ALDOLASE-RXN THREONINE-ALDOLASE-RXN] == * direction: ** left-to-right * common-name: ** t...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HACD7h HACD7h] == * direction: ** reversible * common-name: ** 3-hydroxyacyl-coa dehydrogenase (c16...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=THREONINE-ALDOLASE-RXN THREONINE-ALDOLASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HACD7h HACD7h] ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** threonine aldolase
+
** 3-hydroxyacyl-coa dehydrogenase (c16:0)
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/4.1.2.48 ec-4.1.2.48]
 
−
** [http://enzyme.expasy.org/EC/4.1.2.5 ec-4.1.2.5]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[THR]][c] '''=>''' 1 [[ACETALD]][c] '''+''' 1 [[GLY]][c]
+
* 1.0 [[3-OXOPALMITOYL-COA]][h] '''+''' 1.0 [[NADH]][h] '''+''' 1.0 [[PROTON]][h] '''<=>''' 1.0 [[CPD0-2232]][h] '''+''' 1.0 [[NAD]][h]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ12304]]
+
* Gene: [[SJ03584]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ06446]]
+
* Gene: [[SJ21390]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5436]], L-threonine degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5436 PWY-5436]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[GLYSYN-THR-PWY]], glycine biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=GLYSYN-THR-PWY GLYSYN-THR-PWY]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=reversible}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19626 19626]
+
{{#set: common-name=3-hydroxyacyl-coa dehydrogenase (c16:0)}}
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00751 R00751]
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=threonine aldolase}}
 
−
{{#set: ec-number=ec-4.1.2.48|ec-4.1.2.5}}
 
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Revision as of 09:29, 27 August 2019

Reaction HACD7h

  • direction:
    • reversible
  • common-name:
    • 3-hydroxyacyl-coa dehydrogenase (c16:0)

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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